RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 SPATS2Q86XZ4 545 aaKnown RBP17.8■□□□□ 0.44
USP13-201ENST00000263966 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
USP13-201ENST00000263966 KAT6AQ92794 2004 aa17.8■□□□□ 0.44
USP13-201ENST00000263966 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 TAF1BQ53T94 588 aaPredicted RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 PDXDC2PQ6P474 469 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 MED23Q9ULK4 1368 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 PSMC2P35998 433 aaKnown RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 MAP3K7CLP57077 242 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 NLRP4Q96MN2 994 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 DNAJC6O75061 913 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ARIH2O95376 493 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 BTDP43251 543 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 BRD3Q15059 726 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 SLFN12LQ6IEE8 588 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 PDCD6IPQ8WUM4 868 aaKnown RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 PHF21AQ96BD5 680 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ALCAMQ13740 583 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 CEP170P1Q96L14 293 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 CARD6Q9BX69 1037 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ATICP31939 592 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 MSH2P43246 934 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ZNF654Q8IZM8 581 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 HEXIM2Q96MH2 286 aaKnown RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 RASSF4Q9H2L5 321 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ARHGAP10A1A4S6 786 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 MAP3K10Q02779 954 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 ASIC4Q96FT7 647 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
USP13-201ENST00000263966 ACAP3Q96P50 834 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 TXLNGQ9NUQ3 528 aa17.79■□□□□ 0.44
USP13-201ENST00000263966 ADAM9Q13443 819 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 GTF2H3Q13889 308 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 RRM2BQ7LG56 351 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 MORC3Q14149 939 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 KRT80Q6KB66 452 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 PTPN22Q9Y2R2 807 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 ZNF804BA4D1E1 1349 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 KRT8P05787 483 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 SKOR1P84550 965 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 ZFP42Q96MM3 310 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 CAPN12Q6ZSI9 719 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 KIF2CQ99661 725 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 E9PMD0 336 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 ANP32DO95626 131 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
USP13-201ENST00000263966 TNFAIP2Q03169 654 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 CUL1Q13616 776 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 DHX36Q9H2U1 1008 aaKnown RBP17.78■□□□□ 0.44
USP13-201ENST00000263966 SFSWAPQ12872 951 aaKnown RBP17.78■□□□□ 0.44
USP13-201ENST00000263966 FLOT2Q14254 428 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 TMCO5AQ8N6Q1 288 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 NCLNQ969V3 563 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.441e-7■■□□□ 13.7
USP13-201ENST00000263966 DPYDQ12882 1025 aa17.78■□□□□ 0.44
USP13-201ENST00000263966 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
USP13-201ENST00000263966 SUDS3Q9H7L9 328 aaPredicted RBP17.78■□□□□ 0.44
USP13-201ENST00000263966 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 GSNP06396 782 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 CHMLP26374 656 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 CCDC24Q8N4L8 307 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 CALN1Q9BXU9 219 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 WDR48Q8TAF3 677 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 PBRM1Q86U86 1689 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 BLVRAP53004 296 aa17.77■□□□□ 0.44
USP13-201ENST00000263966 EEF1DP29692 281 aaKnown RBP17.77■□□□□ 0.43
USP13-201ENST00000263966 VCPP55072 806 aaKnown RBP17.77■□□□□ 0.43
USP13-201ENST00000263966 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 NFE2L3Q9Y4A8 694 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 USP17L3A6NCW0 530 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 USP17L4A6NCW7 530 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 PTGDRQ13258 359 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 USP17L1Q7RTZ2 530 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 ULK4Q96C45 1275 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 ABCC10Q5T3U5 1492 aa17.77■□□□□ 0.43
USP13-201ENST00000263966 POC1B-GALNT4F8VUJ3 575 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 PI4K2BG5E9Z4 385 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 OR9Q1Q8NGQ5 310 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
USP13-201ENST00000263966 CYBBP04839 570 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 OR8K1Q8NGG5 319 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 PIK3C2GO75747 1445 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 SERPINB2P05120 415 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 STRIP2Q9ULQ0 834 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 KBTBD13C9JR72 458 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 USP17L21D6R901 530 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
USP13-201ENST00000263966 CAPZA2P47755 286 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 MMS22LQ6ZRQ5 1243 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 G3BP2Q9UN86 482 aaKnown RBP17.76■□□□□ 0.43
USP13-201ENST00000263966 MAFGO15525 162 aa17.76■□□□□ 0.43
USP13-201ENST00000263966 ST8SIA6P61647 398 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms