RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 EIF3HO15372 352 aaKnown RBP eCLIP18.24■□□□□ 0.51
ZNF541-201ENST00000263351 RHBDL3P58872 404 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 SF3A3Q12874 501 aaKnown RBP eCLIP18.24■□□□□ 0.51
ZNF541-201ENST00000263351 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
ZNF541-201ENST00000263351 GJB7Q6PEY0 223 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 PANK4Q9NVE7 773 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
ZNF541-201ENST00000263351 RAD51CO43502 376 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 TCP1P17987 556 aaKnown RBP18.23■□□□□ 0.51
ZNF541-201ENST00000263351 SLC9A1P19634 815 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 PAFAH1B1P43034 410 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 ADCY7P51828 1080 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 USP17L10C9JJH3 530 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 UFL1O94874 794 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 EPHB4P54760 987 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 KRT79Q5XKE5 535 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 COL4A3BPQ9Y5P4 624 aa18.23■□□□□ 0.51
ZNF541-201ENST00000263351 GRID2IPA4D2P6 1211 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 PSMC6P62333 389 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 MFSD14BQ5SR56 506 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 SFMBT2Q5VUG0 894 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
ZNF541-201ENST00000263351 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 POTEFA5A3E0 1075 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 MARCH6O60337 910 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 HPDP32754 393 aaPredicted RBP18.22■□□□□ 0.51
ZNF541-201ENST00000263351 FAM26FQ5R3K3 315 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 IQCEQ6IPM2 695 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 POTEGQ6S5H5 508 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 TADA2BQ86TJ2 420 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 RUFY1Q96T51 708 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 NEUROG2Q9H2A3 272 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 MAGEF1Q9HAY2 307 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 CD209Q9NNX6 404 aa18.22■□□□□ 0.51
ZNF541-201ENST00000263351 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
ZNF541-201ENST00000263351 MYH7BA7E2Y1 1941 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 HSF2BPO75031 334 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 POLD1P28340 1107 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 FLT3P36888 993 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 SCFD1Q8WVM8 642 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 WNK3Q9BYP7 1800 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 PJA2O43164 708 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 RFC4P35249 363 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 FXR2P51116 673 aaKnown RBP eCLIP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 KCNA1Q09470 495 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 TMEM119Q4V9L6 283 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 HERC4Q5GLZ8 1057 aaPredicted RBP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 ZNF572Q7Z3I7 529 aaPredicted RBP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 CCDC84Q86UT8 332 aaPredicted RBP18.21■□□□□ 0.51
ZNF541-201ENST00000263351 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
ZNF541-201ENST00000263351 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
ZNF541-201ENST00000263351 KCNK3O14649 394 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 PPP4CP60510 307 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 PTK2Q05397 1052 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 MYH4Q9Y623 1939 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 ITGA4P13612 1032 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 SLC9C1Q4G0N8 1177 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 GPBP1Q86WP2 473 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 PCDHAC2Q9Y5I4 1007 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
ZNF541-201ENST00000263351 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
ZNF541-201ENST00000263351 RSPH10B2B2RC85 870 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 MYO1FO00160 1098 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 MED24O75448 989 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 RSPH10BP0C881 870 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 COPB2P35606 906 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 LRRC63Q05C16 580 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 KLHL30Q0D2K2 578 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
ZNF541-201ENST00000263351 INPP4AQ96PE3 977 aaPredicted RBP18.19■□□□□ 0.5
ZNF541-201ENST00000263351 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 MAST2Q6P0Q8 1798 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 EBAG9O00559 213 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 NDUFAB1O14561 156 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 SCNN1DP51172 638 aa18.19■□□□□ 0.5
ZNF541-201ENST00000263351 CACNB3P54284 484 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms