RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ANKRD65E5RJM6 399 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 ZMYND10O75800 440 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 YBX3P16989 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
SIM1-201ENST00000262901 TECP42680 631 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MAGEA8P43361 318 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 USP4Q13107 963 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
SIM1-201ENST00000262901 SPATA1Q5VX52 437 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 CCDC25Q86WR0 208 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 KLHL7Q8IXQ5 586 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SLC35F6Q8N357 371 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 GIMAP7Q8NHV1 300 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SPTLC3Q9NUV7 552 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 EPHX2P34913 555 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 TRIM14Q14142 442 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 CNNM4Q6P4Q7 775 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MMS22LQ6ZRQ5 1243 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 BLIDQ8IZY5 108 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 AFAP1L1Q8TED9 768 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SMCO2A6NFE2 343 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 EFCAB8A8MWE9 144 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 TMEM232C9JQI7 657 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 RNF26Q9BY78 433 aaPredicted RBP10.5□□□□□ -0.73
SIM1-201ENST00000262901 IRX2Q9BZI1 471 aaPredicted RBP10.5□□□□□ -0.73
SIM1-201ENST00000262901 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
SIM1-201ENST00000262901 PPP2R3BQ9Y5P8 575 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 STX10O60499 249 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 FAM13AO94988 1023 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 KIF4AO95239 1232 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SCG2P13521 617 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 CTNNA2P26232 953 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MRPL12P52815 198 aaKnown RBP10.5□□□□□ -0.73
SIM1-201ENST00000262901 SP4Q02446 784 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MAEAQ7L5Y9 396 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 HS2ST1Q7LGA3 356 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 EPC1Q9H2F5 836 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SLC39A2Q9NP94 309 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 TMOD4Q9NZQ9 345 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 SAR1BQ9Y6B6 198 aa10.5□□□□□ -0.73
SIM1-201ENST00000262901 CACNA1SQ13698 1873 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 STXBP4Q6ZWJ1 553 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 NCAPG2Q86XI2 1143 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 CCDC65Q8IXS2 484 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 UBLCP1Q8WVY7 318 aaPredicted RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 TBC1D5Q92609 795 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 WRNIP1Q96S55 665 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 IFIH1Q9BYX4 1025 aaKnown RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 KCNF1Q9H3M0 494 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 SCAF8Q9UPN6 1271 aaKnown RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 GCOM1H8Y6P7 765 aaPredicted RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 SMIM22K7EJ46 135 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 TUBBP07437 444 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 FGRP09769 529 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 MYZAPP0CAP1 466 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 EEF2P13639 858 aaKnown RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 CDC25BP30305 580 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 RBL2Q08999 1139 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 CCDC174Q6PII3 467 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 REXO1Q8N1G1 1221 aaKnown RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 SELENOSQ9BQE4 189 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 MYH13Q9UKX3 1938 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 NDUFAB1O14561 156 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 PPP6R2O75170 966 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 FMNL1O95466 1100 aaPredicted RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 GBP2P32456 591 aaPredicted RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 SHMT1P34896 483 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 CHURC1Q8WUH1 139 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 BICD1Q96G01 975 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 PDE11AQ9HCR9 933 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
SIM1-201ENST00000262901 EPN1Q9Y6I3 576 aaPredicted RBP10.49□□□□□ -0.73
SIM1-201ENST00000262901 FRMPD2Q68DX3 1309 aaPredicted RBP10.48□□□□□ -0.73
SIM1-201ENST00000262901 ROBO3Q96MS0 1386 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 IKBKBO14920 756 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 CLCN6P51797 869 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 TUBB4BP68371 445 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 SEC23AQ15436 765 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 CALCRLQ16602 461 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 HHATQ5VTY9 493 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 USP50Q70EL3 339 aaPredicted RBP10.48□□□□□ -0.73
SIM1-201ENST00000262901 RPUSD2Q8IZ73 545 aaKnown RBP10.48□□□□□ -0.73
SIM1-201ENST00000262901 PARD3BQ8TEW8 1205 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 BUB1O43683 1085 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 MMP1P03956 469 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
SIM1-201ENST00000262901 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
SIM1-201ENST00000262901 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
SIM1-201ENST00000262901 GLTPD2A6NH11 291 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms