RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 VAV3Q9UKW4 847 aa27.53■■■□□ 2
SCN1B-201ENST00000262631 VWA3AA6NCI4 1184 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 DDX39AO00148 427 aaKnown RBP27.52■■■□□ 2
SCN1B-201ENST00000262631 PPP6R2O75170 966 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 PRKAR2AP13861 404 aaKnown RBP27.52■■■□□ 2
SCN1B-201ENST00000262631 TECP42680 631 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 TTLL4Q14679 1199 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 CTU1Q7Z7A3 348 aaKnown RBP27.52■■■□□ 2
SCN1B-201ENST00000262631 COPS5Q92905 334 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 CLIC6Q96NY7 704 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 SENP7Q9BQF6 1050 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 TELO2Q9Y4R8 837 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 SRPRBQ9Y5M8 271 aaKnown RBP27.52■■■□□ 2
SCN1B-201ENST00000262631 GAS7O60861 476 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 SMPD1P17405 629 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 ME1P48163 572 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 MAP3K21Q5TCX8 1036 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 KCNV1Q6PIU1 500 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 DTHD1Q6ZMT9 781 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 SH3TC2Q8TF17 1288 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 RIT2Q99578 217 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 PCDHA7Q9UN72 937 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 PCDHA12Q9UN75 941 aa27.52■■■□□ 2
SCN1B-201ENST00000262631 SPIRE1Q08AE8 756 aa27.51■■□□□ 1.99
SCN1B-201ENST00000262631 CYFIP1Q7L576 1253 aa27.51■■□□□ 1.99
SCN1B-201ENST00000262631 KRI1Q8N9T8 703 aaKnown RBP27.51■■□□□ 1.99
SCN1B-201ENST00000262631 LENG1Q96BZ8 264 aaPredicted RBP27.51■■□□□ 1.99
SCN1B-201ENST00000262631 GBP4Q96PP9 640 aa27.51■■□□□ 1.99
SCN1B-201ENST00000262631 NRBP1Q9UHY1 535 aa27.51■■□□□ 1.99
SCN1B-201ENST00000262631 INHAP05111 366 aa27.5■■□□□ 1.99
SCN1B-201ENST00000262631 AXDND1Q5T1B0 1012 aaPredicted RBP27.5■■□□□ 1.99
SCN1B-201ENST00000262631 IQSEC1Q6DN90 963 aa27.5■■□□□ 1.99
SCN1B-201ENST00000262631 TBC1D22BQ9NU19 505 aa27.5■■□□□ 1.99
SCN1B-201ENST00000262631 POTEMA6NI47 508 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 GGPS1O95749 300 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 CCND3P30281 292 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-201ENST00000262631 FXR2P51116 673 aaKnown RBP eCLIP27.49■■□□□ 1.99
SCN1B-201ENST00000262631 B3GNT9Q6UX72 402 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 FERMT2Q96AC1 680 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 SDF4Q9BRK5 362 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 TEKT3Q9BXF9 490 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 CSRNP2Q9H175 543 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 UNC45AQ9H3U1 944 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 NFASCO94856 1347 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 FARP2O94887 1054 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-201ENST00000262631 CCNE2O96020 404 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 TNFAIP2Q03169 654 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 DUSP28Q4G0W2 176 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 SPECC1Q5M775 1068 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 IGSF22Q8N9C0 903 aa27.49■■□□□ 1.99
SCN1B-201ENST00000262631 ELP1O95163 1332 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 POTEFA5A3E0 1075 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 CHMP2AO43633 222 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 SP4Q02446 784 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 NEDD9Q14511 834 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 CELF3Q5SZQ8 465 aaKnown RBP27.48■■□□□ 1.99
SCN1B-201ENST00000262631 TMEM87AQ8NBN3 555 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 JPH1Q9HDC5 661 aaPredicted RBP27.48■■□□□ 1.99
SCN1B-201ENST00000262631 FAM184BQ9ULE4 1060 aa27.48■■□□□ 1.99
SCN1B-201ENST00000262631 PP2D1A8MPX8 630 aa27.47■■□□□ 1.99
SCN1B-201ENST00000262631 CDC25AP30304 524 aa27.47■■□□□ 1.99
SCN1B-201ENST00000262631 ARHGAP1Q07960 439 aa27.47■■□□□ 1.99
SCN1B-201ENST00000262631 PPP2R5CQ13362 524 aa27.47■■□□□ 1.99
SCN1B-201ENST00000262631 TPRNQ4KMQ1 711 aa27.47■■□□□ 1.99
SCN1B-201ENST00000262631 GNEQ9Y223 722 aaKnown RBP27.47■■□□□ 1.99
SCN1B-201ENST00000262631 EML1O00423 815 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 AKR1A1P14550 325 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 CNGA1P29973 690 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 TMEM266Q2M3C6 531 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 METTL7BQ6UX53 244 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 USP49Q70CQ1 688 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 SEPT4O43236 478 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 PRPF40AO75400 957 aaKnown RBP27.46■■□□□ 1.99
SCN1B-201ENST00000262631 SLC9C1Q4G0N8 1177 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 NCAPH2Q6IBW4 605 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 DHX37Q8IY37 1157 aaKnown RBP27.46■■□□□ 1.99
SCN1B-201ENST00000262631 GIMAP8Q8ND71 665 aaPredicted RBP27.46■■□□□ 1.99
SCN1B-201ENST00000262631 MLXIPQ9HAP2 919 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 SLC9A2Q9UBY0 812 aa27.46■■□□□ 1.99
SCN1B-201ENST00000262631 DOCK5Q9H7D0 1870 aa27.45■■□□□ 1.98
SCN1B-201ENST00000262631 CUTAO60888 179 aa27.45■■□□□ 1.98
SCN1B-201ENST00000262631 GADD45BO75293 160 aaPredicted RBP27.45■■□□□ 1.98
SCN1B-201ENST00000262631 HSDL1Q3SXM5 330 aa27.45■■□□□ 1.98
SCN1B-201ENST00000262631 SHC4Q6S5L8 630 aa27.45■■□□□ 1.98
SCN1B-201ENST00000262631 LONP1P36776 959 aaKnown RBP27.44■■□□□ 1.98
SCN1B-201ENST00000262631 PDIA5Q14554 519 aa27.44■■□□□ 1.98
SCN1B-201ENST00000262631 FBXO46Q6PJ61 603 aaPredicted RBP27.44■■□□□ 1.98
SCN1B-201ENST00000262631 EPSTI1Q96J88 318 aa27.44■■□□□ 1.98
SCN1B-201ENST00000262631 GH1P01241 217 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 ACTR2P61160 394 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 IRX5P78411 483 aaPredicted RBP27.43■■□□□ 1.98
SCN1B-201ENST00000262631 KRT76Q01546 638 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 ADALQ6DHV7 355 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 ZNF746Q6NUN9 644 aaPredicted RBP27.43■■□□□ 1.98
SCN1B-201ENST00000262631 SPATA33Q96N06 139 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 PRDM10Q9NQV6 1147 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 LRWD1Q9UFC0 647 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 NKRFO15226 690 aaKnown RBP eCLIP27.43■■□□□ 1.98
SCN1B-201ENST00000262631 CSPP1Q1MSJ5 1256 aa27.43■■□□□ 1.98
SCN1B-201ENST00000262631 ZNF579Q8NAF0 562 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms