RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 MSCO60682 206 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 SMPD1P17405 629 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 PTGS1P23219 599 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 KRT40Q6A162 431 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 OGDHLQ9ULD0 1010 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
PFDN1-201ENST00000261813 FRMPD3Q5JV73 1810 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 H3BQV1 296 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 STX6O43752 255 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 ARIH2O95376 493 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 MMP1P03956 469 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 RARBP10826 455 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 SREBF1P36956 1147 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 TRIM29Q14134 588 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 GJC2Q5T442 439 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-201ENST00000261813 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 CRYGNQ8WXF5 182 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 INPP4AQ96PE3 977 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-201ENST00000261813 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
PFDN1-201ENST00000261813 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
PFDN1-201ENST00000261813 EDIL3O43854 480 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 ADAMTS4O75173 837 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
PFDN1-201ENST00000261813 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
PFDN1-201ENST00000261813 ITGB5P18084 799 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 SYT1P21579 422 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 XRRA1Q6P2D8 792 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 COPS5Q92905 334 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 XPNPEP3Q9NQH7 507 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 UBIAD1Q9Y5Z9 338 aa13.18□□□□□ -0.3
PFDN1-201ENST00000261813 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
PFDN1-201ENST00000261813 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 STAM2O75886 525 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 PGK1P00558 417 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
PFDN1-201ENST00000261813 KRT2P35908 639 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 NR5A1Q13285 461 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 LY6KQ17RY6 165 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
PFDN1-201ENST00000261813 DIS3L2Q8IYB7 885 aaKnown RBP13.17□□□□□ -0.3
PFDN1-201ENST00000261813 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 DDX41Q9UJV9 622 aaKnown RBP13.17□□□□□ -0.3
PFDN1-201ENST00000261813 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
PFDN1-201ENST00000261813 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 H0YGN5 161 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 CTAGE5O15320 804 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 BRD1O95696 1058 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 CYP3A4P08684 503 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 ICAM3P32942 547 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 GJA9P57773 515 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 SP2Q02086 613 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 LRRC41Q15345 812 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN1-201ENST00000261813 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
PFDN1-201ENST00000261813 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-201ENST00000261813 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
PFDN1-201ENST00000261813 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-201ENST00000261813 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 DYNC1LI2O43237 492 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-201ENST00000261813 FIBPO43427 364 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 ZSCAN22P10073 491 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-201ENST00000261813 NKX3-2P78367 333 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 NONOQ15233 471 aaKnown RBP eCLIP13.15□□□□□ -0.3
PFDN1-201ENST00000261813 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 PIK3AP1Q6ZUJ8 805 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 DIS3LQ8TF46 1054 aaKnown RBP13.15□□□□□ -0.3
PFDN1-201ENST00000261813 DPF3Q92784 378 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 GPRASP2Q96D09 838 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
PFDN1-201ENST00000261813 JADE2Q9NQC1 790 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms