RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 IL17AQ16552 155 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 TTBK2Q6IQ55 1244 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 TXNRD3Q86VQ6 643 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 KIF2BQ8N4N8 673 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
PALB2-201ENST00000261584 LDHCP07864 332 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 H2AFZP0C0S5 128 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 KRT5P13647 590 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 SLC9A1P19634 815 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 H2AFVQ71UI9 128 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 THAP9Q9H5L6 903 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 PPP1R1BQ9UD71 204 aaPredicted RBP11.06□□□□□ -0.64
PALB2-201ENST00000261584 EXOC3O60645 756 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 DDAH1O94760 285 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 GCKP35557 465 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 TPTE2Q6XPS3 522 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
PALB2-201ENST00000261584 A0A087X0T9 212 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 WDR91A4D1P6 747 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 FAM228BP0C875 321 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 PDHBP11177 359 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 CCDC174Q6PII3 467 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 FAM84BQ96KN1 310 aaPredicted RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 COL4A3BPQ9Y5P4 624 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 CLTCQ00610 1675 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 SNCBQ16143 134 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 CCDC6Q16204 474 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 ZNF473Q8WTR7 871 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 GLG1Q92896 1179 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 MINPP1Q9UNW1 487 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 FLOT1O75955 427 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 TRIM49P0CI25 452 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 TRIM49CP0CI26 452 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 SRGNP10124 158 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 EPB41P11171 864 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 CALCOCO2Q13137 446 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 IFI16Q16666 785 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 RUFY4Q6ZNE9 571 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 VSIG1Q86XK7 387 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 FBF1Q8TES7 1133 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 NUDT12Q9BQG2 462 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 INTS9Q9NV88 658 aaKnown RBP11.05□□□□□ -0.64
PALB2-201ENST00000261584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■□□ 14.8
PALB2-201ENST00000261584 AMFRQ9UKV5 643 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
PALB2-201ENST00000261584 IFNB1P01574 187 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 CTNNA2P26232 953 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 SMAD1Q15797 465 aaKnown RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 RPAINQ86UA6 219 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.04□□□□□ -0.64
PALB2-201ENST00000261584 CEP95Q96GE4 821 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 PSMD14O00487 310 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 PPP1R37O75864 691 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 CSF1RP07333 972 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 ITGA4P13612 1032 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 FGFR4P22455 802 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 PCK1P35558 622 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 SUPT20HQ8NEM7 779 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 HNRNPLLQ8WVV9 542 aaKnown RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 SH2D4AQ9H788 454 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 SLAIN2Q9P270 581 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 INTUQ9ULD6 942 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 MEGF6O75095 1541 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 SART1O43290 800 aaKnown RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 STAT1P42224 750 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 KCNJ1P48048 391 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 MRPL12P52815 198 aaKnown RBP11.04□□□□□ -0.64
PALB2-201ENST00000261584 KCNH2Q12809 1159 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 KAZNQ674X7 775 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 CCDC63Q8NA47 563 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 CASKIN2Q8WXE0 1202 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 BHMT2Q9H2M3 363 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 GCNT4Q9P109 453 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 HDAC9Q9UKV0 1011 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms