RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 EPN3Q9H201 632 aa11.93□□□□□ -0.5
CHRNA1-201ENST00000261007 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
CHRNA1-201ENST00000261007 NHEJ1Q9H9Q4 299 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-201ENST00000261007 NYAP2Q9P242 653 aa11.93□□□□□ -0.5
CHRNA1-201ENST00000261007 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
CHRNA1-201ENST00000261007 H0YHG0 523 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 SLC26A4O43511 780 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 RHOBTB3O94955 611 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 RXRBP28702 533 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 PRCPP42785 496 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MKL1Q969V6 931 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 LRRC1Q9BTT6 524 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 RIC8AQ9NPQ8 531 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 STIM2Q9P246 746 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MAGEC2Q9UBF1 373 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 STK17AQ9UEE5 414 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 RCCD1A6NED2 376 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 TMCO5BA8MYB1 307 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 PSMA7O14818 248 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 ECE2O60344 883 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 SMTNP53814 917 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MREGQ8N565 214 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 CUL5Q93034 780 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 ARL8AQ96BM9 186 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MTRQ99707 1265 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 DMGDHQ9UI17 866 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
CHRNA1-201ENST00000261007 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 ZBTB5O15062 677 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 ENTPD3O75355 529 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 PDIA5Q14554 519 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 SPA17Q15506 151 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 CCDC96Q2M329 555 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 NAALADL2Q58DX5 795 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 DHTKD1Q96HY7 919 aaPredicted RBP11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 C7orf25Q9BPX7 421 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 EXOC1Q9NV70 894 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 HYOU1Q9Y4L1 999 aa11.91□□□□□ -0.5
CHRNA1-201ENST00000261007 BICDL2A1A5D9 508 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 COBLO75128 1261 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 LSP1P33241 339 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ACTN3Q08043 901 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 PDCLQ13371 301 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 NEDD9Q14511 834 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 CALCRLQ16602 461 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 IFT20Q8IY31 132 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 VCPKMTQ9H867 229 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 JMJD4Q9H9V9 463 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 TFR2Q9UP52 801 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 LCA5LO95447 670 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 CERKLQ49MI3 558 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 PREPLQ4J6C6 727 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 NAA35Q5VZE5 725 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 HAUS3Q68CZ6 603 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 FAM114A1Q8IWE2 563 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 GIMAP8Q8ND71 665 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ZNF473Q8WTR7 871 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 HDAC7Q8WUI4 952 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 STAMQ92783 540 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 MTMR9Q96QG7 549 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 SUFUQ9UMX1 484 aa11.9□□□□□ -0.5
CHRNA1-201ENST00000261007 ZNF646O15015 1829 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms