RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 STYK1Q6J9G0 422 aa7.49□□□□□ -1.21
TRA2B-201ENST00000259043 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
TRA2B-201ENST00000259043 FAM126BQ8IXS8 530 aa7.49□□□□□ -1.21
TRA2B-201ENST00000259043 FAM26EQ8N5C1 309 aa7.49□□□□□ -1.21
TRA2B-201ENST00000259043 CHAMP1Q96JM3 812 aa7.49□□□□□ -1.21
TRA2B-201ENST00000259043 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 HGSO14964 777 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-201ENST00000259043 NOBOXO60393 691 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 LBX2Q6XYB7 198 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 ASXL2Q76L83 1435 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 ZFYVE21Q9BQ24 234 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 GORASP1Q9BQQ3 440 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 EPB41L1Q9H4G0 881 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 SPATA6Q9NWH7 488 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-201ENST00000259043 SMPD4Q9NXE4 827 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 DUSP10Q9Y6W6 482 aa7.48□□□□□ -1.21
TRA2B-201ENST00000259043 TCRBV5S2A0A599 114 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 CCDC85CA6NKD9 419 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 CNR2P34972 360 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 SSRP1Q08945 709 aaKnown RBP7.47□□□□□ -1.21
TRA2B-201ENST00000259043 CR1LQ2VPA4 569 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 LRP10Q7Z4F1 713 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 CARFQ8N187 725 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
TRA2B-201ENST00000259043 ARRDC4Q8NCT1 418 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 DDX1Q92499 740 aaKnown RBP7.47□□□□□ -1.21
TRA2B-201ENST00000259043 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
TRA2B-201ENST00000259043 PPP1R1BQ9UD71 204 aaPredicted RBP7.47□□□□□ -1.21
TRA2B-201ENST00000259043 ITGB3P05106 788 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 C6orf222P0C671 652 aaPredicted RBP7.46□□□□□ -1.22
TRA2B-201ENST00000259043 CYP2C8P10632 490 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 GJA9P57773 515 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 GPR85P60893 370 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.22
TRA2B-201ENST00000259043 CHRNA2Q15822 529 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 C11orf84Q9BUA3 381 aaPredicted RBP7.46□□□□□ -1.22
TRA2B-201ENST00000259043 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
TRA2B-201ENST00000259043 DGKIO75912 1065 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 FAM153BP0C7A2 387 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 HABP4Q5JVS0 413 aaKnown RBP7.45□□□□□ -1.22
TRA2B-201ENST00000259043 FAM209AQ5JX71 171 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 SCUBE1Q8IWY4 988 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 EXOC2Q96KP1 924 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 DEPDC7Q96QD5 511 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 RBM15Q96T37 977 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRA2B-201ENST00000259043 PCDHB4Q9Y5E5 795 aa7.45□□□□□ -1.22
TRA2B-201ENST00000259043 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 MATN3O15232 486 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 SUV39H1O43463 412 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 GRK2P25098 689 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 GRK3P35626 688 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 STAT5AP42229 794 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 ITGA1P56199 1179 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
TRA2B-201ENST00000259043 SF3A1Q15459 793 aaKnown RBP7.44□□□□□ -1.22
TRA2B-201ENST00000259043 KIZQ2M2Z5 673 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 OTOP3Q7RTS5 596 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 IFNL3Q8IZI9 196 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.222e-7■■□□□ 14.5
TRA2B-201ENST00000259043 PIP4K2CQ8TBX8 421 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 MKL1Q969V6 931 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 ZBTB8AQ96BR9 441 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 SMOC1Q9H4F8 434 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 PCDH18Q9HCL0 1135 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 SLC6A20Q9NP91 592 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 DTLQ9NZJ0 730 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 ASH2LQ9UBL3 628 aa7.44□□□□□ -1.22
TRA2B-201ENST00000259043 ARHGEF11O15085 1522 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 C1QTNF3-AMACRE9PGA6 284 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 THBS2P35442 1172 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 LONRF2Q1L5Z9 754 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 CPZQ66K79 652 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 JMYQ8N9B5 988 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 PHOSPHO1Q8TCT1 267 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 KISS1RQ969F8 398 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-201ENST00000259043 SRRDQ9UH36 339 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 WASF3Q9UPY6 502 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 TRAF6Q9Y4K3 522 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 FANCD2Q9BXW9 1451 aa7.43□□□□□ -1.22
TRA2B-201ENST00000259043 LRG1P02750 347 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 ADAM9Q13443 819 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 TEPPQ6URK8 271 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 ZC3H18Q86VM9 953 aaKnown RBP7.42□□□□□ -1.22
TRA2B-201ENST00000259043 TTC9BQ8N6N2 239 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 KYQ8NBH2 561 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 TOE1Q96GM8 510 aaKnown RBP7.42□□□□□ -1.22
TRA2B-201ENST00000259043 C1QTNF3Q9BXJ4 246 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-201ENST00000259043 HSPBP1Q9NZL4 362 aa7.42□□□□□ -1.22
TRA2B-201ENST00000259043 NTMQ9P121 344 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms