RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 BMP2KQ9NSY1 1161 aaPredicted RBP30.87■■■□□ 2.53
CCM2-201ENST00000258781 MAP3K20Q9NYL2 800 aaKnown RBP30.87■■■□□ 2.53
CCM2-201ENST00000258781 KCNH4Q9UQ05 1017 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 TRIM49BA6NDI0 452 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 KCNJ18B7U540 433 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 FCER1AP12319 257 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 EHHADHQ08426 723 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 KCNJ12Q14500 433 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 CHADLQ6NUI6 762 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 CATSPERGQ6ZRH7 1159 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 KCTD17Q8N5Z5 321 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 KIAA0895Q8NCT3 520 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 ATG4CQ96DT6 458 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 KCND1Q9NSA2 647 aa30.86■■■□□ 2.53
CCM2-201ENST00000258781 RPTORQ8N122 1335 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 ZBED4O75132 1171 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 PLA2G4BP0C869 781 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 PBX1P40424 430 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 PMS1P54277 932 aaKnown RBP30.85■■■□□ 2.53
CCM2-201ENST00000258781 SETQ01105 290 aaPredicted RBP30.85■■■□□ 2.53
CCM2-201ENST00000258781 CEP55Q53EZ4 464 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 DNAJC19Q96DA6 116 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 TRIM47Q96LD4 638 aa30.85■■■□□ 2.53
CCM2-201ENST00000258781 E9PMD0 336 aa30.84■■■□□ 2.53
CCM2-201ENST00000258781 SLC5A5Q92911 643 aa30.84■■■□□ 2.53
CCM2-201ENST00000258781 EEF1GP26641 437 aaKnown RBP30.84■■■□□ 2.53
CCM2-201ENST00000258781 CST9Q5W186 159 aa30.84■■■□□ 2.53
CCM2-201ENST00000258781 CATSPER3Q86XQ3 398 aa30.84■■■□□ 2.53
CCM2-201ENST00000258781 POLR3CQ9BUI4 534 aaPredicted RBP30.84■■■□□ 2.53
CCM2-201ENST00000258781 RAVER2Q9HCJ3 691 aaKnown RBP30.84■■■□□ 2.53
CCM2-201ENST00000258781 CTDP1Q9Y5B0 961 aaPredicted RBP30.84■■■□□ 2.53
CCM2-201ENST00000258781 VWA5AO00534 786 aa30.83■■■□□ 2.53
CCM2-201ENST00000258781 CXCL11O14625 94 aa30.83■■■□□ 2.53
CCM2-201ENST00000258781 TEX33O43247 280 aa30.83■■■□□ 2.53
CCM2-201ENST00000258781 COPB1P53618 953 aaKnown RBP30.83■■■□□ 2.53
CCM2-201ENST00000258781 FKBP1BP68106 108 aa30.83■■■□□ 2.53
CCM2-201ENST00000258781 DNTTIP2Q5QJE6 756 aaKnown RBP30.83■■■□□ 2.53
CCM2-201ENST00000258781 IRF2BP1Q8IU81 584 aa30.83■■■□□ 2.53
CCM2-201ENST00000258781 DUSP9Q99956 384 aaKnown RBP30.83■■■□□ 2.53
CCM2-201ENST00000258781 MEIS1O00470 390 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 NFIBO00712 420 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 SPATA31C1P0DKV0 1188 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 ALAS1P13196 640 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 CPXCR1Q8N123 301 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 GUF1Q8N442 669 aaKnown RBP30.82■■■□□ 2.53
CCM2-201ENST00000258781 SLC10A4Q96EP9 437 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 TMX1Q9H3N1 280 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 SLC39A2Q9NP94 309 aa30.82■■■□□ 2.53
CCM2-201ENST00000258781 ITIH6Q6UXX5 1313 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 PSMD10O75832 226 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 IDEP14735 1019 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 DSG3P32926 999 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 COG2Q14746 738 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 GADL1Q6ZQY3 521 aa30.82■■■□□ 2.52
CCM2-201ENST00000258781 POTEFA5A3E0 1075 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 UNCXA6NJT0 531 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 PPP2R5CQ13362 524 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 MOGSQ13724 837 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 PTPN21Q16825 1174 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 POTEGQ6S5H5 508 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 POTEEQ6S8J3 1075 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 PROCA1Q8NCQ7 364 aaPredicted RBP30.81■■■□□ 2.52
CCM2-201ENST00000258781 SRRTQ9BXP5 876 aaKnown RBP30.81■■■□□ 2.52
CCM2-201ENST00000258781 ADAMTS5Q9UNA0 930 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 DNM3Q9UQ16 869 aa30.81■■■□□ 2.52
CCM2-201ENST00000258781 N4BP3O15049 544 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 SSBP05455 408 aaKnown RBP eCLIP30.8■■■□□ 2.52
CCM2-201ENST00000258781 SLC12A3P55017 1021 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 UBXN2AP68543 259 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 LRCH2Q5VUJ6 765 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 CENPPQ6IPU0 288 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 GPBP1Q86WP2 473 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 CSGALNACT2Q8N6G5 542 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 C2orf69Q8N8R5 385 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 REPS2Q8NFH8 660 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 FRMPD4Q14CM0 1322 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 SPDYE16A6NNV3 312 aaPredicted RBP30.8■■■□□ 2.52
CCM2-201ENST00000258781 COASYQ13057 564 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 ANKRD40Q6AI12 368 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 FOXR2Q6PJQ5 311 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 OTOP1Q7RTM1 612 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 NIPA1Q7RTP0 329 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 FAM114A1Q8IWE2 563 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 CCDC65Q8IXS2 484 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 HPS3Q969F9 1004 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 MXRA8Q9BRK3 442 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 PANK4Q9NVE7 773 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 COL20A1Q9P218 1284 aa30.8■■■□□ 2.52
CCM2-201ENST00000258781 MAGEC2Q9UBF1 373 aaPredicted RBP30.8■■■□□ 2.52
CCM2-201ENST00000258781 CYP11B2P19099 503 aa30.79■■■□□ 2.52
CCM2-201ENST00000258781 EIF2AK1Q9BQI3 630 aaKnown RBP30.79■■■□□ 2.52
CCM2-201ENST00000258781 WDR11Q9BZH6 1224 aa30.79■■■□□ 2.52
CCM2-201ENST00000258781 TAB2Q9NYJ8 693 aa30.79■■■□□ 2.52
CCM2-201ENST00000258781 A0A0G2JMZ2 1700 aa30.79■■■□□ 2.52
CCM2-201ENST00000258781 BCRP11274 1271 aa30.78■■■□□ 2.52
CCM2-201ENST00000258781 TERF1P54274 439 aa30.78■■■□□ 2.52
CCM2-201ENST00000258781 MUM1L1Q5H9M0 696 aa30.78■■■□□ 2.52
CCM2-201ENST00000258781 GPBP1L1Q9HC44 474 aaPredicted RBP30.78■■■□□ 2.52
CCM2-201ENST00000258781 TUFT1Q9NNX1 390 aa30.78■■■□□ 2.52
CCM2-201ENST00000258781 SYT2Q8N9I0 419 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms