RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 ACTRT1Q8TDG2 376 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 UBLCP1Q8WVY7 318 aaPredicted RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 CNOT8Q9UFF9 292 aaKnown RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 TRMT112Q9UI30 125 aaKnown RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 CCT8L1PA6NM43 557 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 M0R2N6 131 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 OPLAHO14841 1288 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 ATP2C2O75185 946 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 NUP98P52948 1817 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 RPS6KA1Q15418 735 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 HIBCHQ6NVY1 386 aaPredicted RBP12.62□□□□□ -0.39
TROAP-201ENST00000257909 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 PSMD1Q99460 953 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 BAIAP2L1Q9UHR4 511 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
TROAP-201ENST00000257909 BTNL10A8MVZ5 291 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 EIF3BP55884 814 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 FOXR2Q6PJQ5 311 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 DAGLBQ8NCG7 672 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 CFAP73A6NFT4 308 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 CCDC188H7C350 402 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ITIH4Q14624 930 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 KIAA0753Q2KHM9 967 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ERMARDQ5T6L9 678 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 SLC39A2Q9NP94 309 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 PCDHA6Q9UN73 950 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 PACSIN2Q9UNF0 486 aaPredicted RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 PCDHA8Q9Y5H6 950 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 ITGB4P16144 1822 aa12.61□□□□□ -0.39
TROAP-201ENST00000257909 BAZ2AQ9UIF9 1905 aaKnown RBP12.61□□□□□ -0.39
TROAP-201ENST00000257909 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 KCNK3O14649 394 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 ASAP2O43150 1006 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 PPP1R12BO60237 982 aaPredicted RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 BCAMP50895 628 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 HLFQ16534 295 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 INF2Q27J81 1249 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 SLC12A4Q9UP95 1085 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 F8W031 263 aaPredicted RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
TROAP-201ENST00000257909 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 USP11P51784 963 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 FAM83BQ5T0W9 1011 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 UNC13DQ70J99 1090 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TMC3Q7Z5M5 1100 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 TSG101Q99816 390 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 FAM129AQ9BZQ8 928 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
TROAP-201ENST00000257909 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
TROAP-201ENST00000257909 FRMD3A2A2Y4 597 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 PGRMC1O00264 195 aaKnown RBP12.59□□□□□ -0.39
TROAP-201ENST00000257909 TLR2O60603 784 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 KIF4AO95239 1232 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 STARD3NLO95772 234 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 SV2BQ7L1I2 683 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 GPIHBP1Q8IV16 184 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 CCDC26Q8TAB7 109 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
TROAP-201ENST00000257909 TLCD1Q96CP7 247 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 SLITRK6Q9H5Y7 841 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.59□□□□□ -0.39
TROAP-201ENST00000257909 SLIT2O94813 1529 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms