RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TUBBP07437 444 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 FAM153BP0C7A2 387 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 HOXA13P31271 388 aaPredicted RBP14.88□□□□□ -0.03
VHL-201ENST00000256474 FKBP3Q00688 224 aaKnown RBP14.88□□□□□ -0.03
VHL-201ENST00000256474 FAM153CQ494X1 144 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 CENPPQ6IPU0 288 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 DDX42Q86XP3 938 aaKnown RBP eCLIP14.88□□□□□ -0.034e-9■□□□□ 9.6
VHL-201ENST00000256474 CUEDC2Q9H467 287 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 MKRN1Q9UHC7 482 aaKnown RBP14.88□□□□□ -0.03
VHL-201ENST00000256474 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 A0A087X0T9 212 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 H0YHG0 523 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 FAM228BP0C875 321 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 NR2F2P24468 414 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 ERGIC2Q96RQ1 377 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 CAPS2Q9BXY5 557 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 MYH14Q7Z406 1995 aaKnown RBP14.88□□□□□ -0.03
VHL-201ENST00000256474 CLSTN1O94985 981 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 PLA2G4BP0C869 781 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 SLC9A1P19634 815 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 ABCB4P21439 1286 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 RNF187Q5TA31 235 aaPredicted RBP14.88□□□□□ -0.03
VHL-201ENST00000256474 GJB7Q6PEY0 223 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 OR2W6PQ8NHA6 318 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 CUL5Q93034 780 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 TSPYL1Q9H0U9 437 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 STIM2Q9P246 746 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 SIK3Q9Y2K2 1263 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 LEMD3Q9Y2U8 911 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 PCDHAC2Q9Y5I4 1007 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 MYH10P35580 1976 aa14.88□□□□□ -0.03
VHL-201ENST00000256474 DISP2A7MBM2 1401 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 SMIM23A6NLE4 172 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 GDF11O95390 407 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 GLI1P08151 1106 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 MUM1L1Q5H9M0 696 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 SLC10A5Q5PT55 438 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 KSR1Q8IVT5 923 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 MTMR4Q9NYA4 1195 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 NDUFAB1O14561 156 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 MYL1P05976 194 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 TCP1P17987 556 aaKnown RBP14.87□□□□□ -0.03
VHL-201ENST00000256474 MRPL12P52815 198 aaKnown RBP14.87□□□□□ -0.03
VHL-201ENST00000256474 ASIC2Q16515 512 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 PDXDC1Q6P996 788 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 CCDC65Q8IXS2 484 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 JMJD4Q9H9V9 463 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
VHL-201ENST00000256474 EMILIN3Q9NT22 766 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 POLLQ9UGP5 575 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 ZC3H12CQ9C0D7 883 aaKnown RBP14.87□□□□□ -0.03
VHL-201ENST00000256474 DAGLAQ9Y4D2 1042 aa14.87□□□□□ -0.03
VHL-201ENST00000256474 SPATA31A5Q5VU36 1347 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 SPATA31A7Q8IWB4 1347 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 AGPSO00116 658 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 KCNMA1Q12791 1236 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
VHL-201ENST00000256474 GUF1Q8N442 669 aaKnown RBP14.86□□□□□ -0.03
VHL-201ENST00000256474 RPGRIP1Q96KN7 1286 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 TLR10Q9BXR5 811 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 EBAG9O00559 213 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 PSMC6P62333 389 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
VHL-201ENST00000256474 PRR5LQ6MZQ0 368 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
VHL-201ENST00000256474 PIGOQ8TEQ8 1089 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 ANO9A1A5B4 782 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 GCNT3O95395 438 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 GUCY1A3Q02108 690 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 NFIAQ12857 509 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 DAGLBQ8NCG7 672 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 DPH5Q9H2P9 285 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
VHL-201ENST00000256474 LUC7LQ9NQ29 371 aaKnown RBP14.86□□□□□ -0.03
VHL-201ENST00000256474 BCL9LQ86UU0 1499 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 CETN3O15182 167 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 SERPINB2P05120 415 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 USP8P40818 1118 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 CASP5P51878 434 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 CEP85LQ5SZL2 805 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 HAUS3Q68CZ6 603 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 ZNF622Q969S3 477 aaKnown RBP eCLIP14.85□□□□□ -0.03
VHL-201ENST00000256474 ZIM3Q96PE6 472 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 GOPCQ9HD26 462 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 STK17AQ9UEE5 414 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 RSPH10B2B2RC85 870 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 PPP1R11O60927 126 aaPredicted RBP14.85□□□□□ -0.03
VHL-201ENST00000256474 RSPH10BP0C881 870 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 PLCG2P16885 1265 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 KCNH2Q12809 1159 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 TTC31Q49AM3 519 aaPredicted RBP14.85□□□□□ -0.03
VHL-201ENST00000256474 KLHDC7AQ5VTJ3 777 aa14.85□□□□□ -0.03
VHL-201ENST00000256474 UHMK1Q8TAS1 419 aaKnown RBP14.85□□□□□ -0.03
VHL-201ENST00000256474 PPANQ9NQ55 473 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms