RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 THAP9Q9H5L6 903 aa10.2□□□□□ -0.78
RPA1-201ENST00000254719 SIX2Q9NPC8 291 aa10.2□□□□□ -0.78
RPA1-201ENST00000254719 ENC1O14682 589 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 LRRN2O75325 713 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 STAT3P40763 770 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 PRELPP51888 382 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 GOLGA1Q92805 767 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 EHD2Q9NZN4 543 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 COL2A1P02458 1487 aaPredicted RBP10.19□□□□□ -0.78
RPA1-201ENST00000254719 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 GDAP1L1Q96MZ0 367 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SLF1Q9BQI6 1058 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SYT11Q9BT88 431 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SLC39A2Q9NP94 309 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 EML1O00423 815 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SLC27A3Q5K4L6 730 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 NEK8Q86SG6 692 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CABP7Q86V35 215 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 RBM46Q8TBY0 533 aaKnown RBP10.19□□□□□ -0.78
RPA1-201ENST00000254719 RRP36Q96EU6 259 aaKnown RBP10.19□□□□□ -0.78
RPA1-201ENST00000254719 IDI2Q9BXS1 227 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 ZHX3Q9H4I2 956 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 MYO3BQ8WXR4 1341 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 OTOFQ9HC10 1997 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CTAGE15A4D2H0 777 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SYF2O95926 243 aaKnown RBP10.19□□□□□ -0.78
RPA1-201ENST00000254719 CTAGE8P0CG41 777 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CYP27A1Q02318 531 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SPP2Q13103 211 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CTAGE6Q86UF2 777 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CTAGE4Q8IX94 777 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 WDR18Q9BV38 432 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 POLD4Q9HCU8 107 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 SMARCAL1Q9NZC9 954 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 TTF2Q9UNY4 1162 aaKnown RBP10.19□□□□□ -0.78
RPA1-201ENST00000254719 PLAGL2Q9UPG8 496 aa10.19□□□□□ -0.78
RPA1-201ENST00000254719 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 H7C1D1 291 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 KRT86O43790 486 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 ERCC3P19447 782 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 HOXA7P31268 230 aaPredicted RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 LRRC41Q15345 812 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 CCDC96Q2M329 555 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 GALNT17Q6IS24 598 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 TUBGCP2Q9BSJ2 902 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 EHD4Q9H223 541 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 TELO2Q9Y4R8 837 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 MARSP56192 900 aaKnown RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 FIGNQ5HY92 759 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 RAD54LQ92698 747 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 P2RX5Q93086 422 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 STRA6Q9BX79 667 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 STK24Q9Y6E0 443 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 F8W031 263 aaPredicted RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 LAD1O00515 517 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 ITGBL1O95965 494 aaPredicted RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 TRIM21P19474 475 aaKnown RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 HHIPL2Q6UWX4 724 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 DDX12PQ92771 950 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 DRC1Q96MC2 740 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 GLIS2Q9BZE0 524 aaPredicted RBP10.18□□□□□ -0.78
RPA1-201ENST00000254719 VAT1LQ9HCJ6 419 aa10.18□□□□□ -0.78
RPA1-201ENST00000254719 EGFRP00533 1210 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 CCNE1P24864 410 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 DGKZQ13574 1117 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 NUP58Q9BVL2 599 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 DBNDD1Q9H9R9 158 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 E9PMD0 336 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 C6orf229H3BNL8 230 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 CYP11B2P19099 503 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 ECHS1P30084 290 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 ECE1P42892 770 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 NAPAP54920 295 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 PDIA5Q14554 519 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 TRADDQ15628 312 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 ODF2Q5BJF6 829 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 PRMT6Q96LA8 375 aaPredicted RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 CNOT6LQ96LI5 555 aaKnown RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 GANQ9H2C0 597 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 EEF2P13639 858 aaKnown RBP10.17□□□□□ -0.78
RPA1-201ENST00000254719 KRT9P35527 623 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 RBM5P52756 815 aaKnown RBP eCLIP10.17□□□□□ -0.78
RPA1-201ENST00000254719 FAM193AP78312 1265 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 CETN1Q12798 172 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 PICALMQ13492 652 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 CCDC40Q4G0X9 1142 aa10.17□□□□□ -0.78
RPA1-201ENST00000254719 COA1Q9GZY4 146 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms