RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HADHQ16836 314 aaKnown RBP16.4■□□□□ 0.22
UBE4B-201ENST00000253251 GRAMD1CQ8IYS0 662 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
UBE4B-201ENST00000253251 RAD54LQ92698 747 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 RNF34Q969K3 372 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 ANKRD36BP1Q96IX9 119 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 BHMT2Q9H2M3 363 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 ACAD9Q9H845 621 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 KIAA1586Q9HCI6 787 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 ZNF70Q9UC06 446 aaPredicted RBP16.4■□□□□ 0.22
UBE4B-201ENST00000253251 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.22
UBE4B-201ENST00000253251 CASP14P31944 242 aa16.39■□□□□ 0.22
UBE4B-201ENST00000253251 MTMR3Q13615 1198 aa16.39■□□□□ 0.22
UBE4B-201ENST00000253251 SNRNP48Q6IEG0 339 aaKnown RBP16.39■□□□□ 0.22
UBE4B-201ENST00000253251 OXER1Q8TDS5 423 aa16.39■□□□□ 0.22
UBE4B-201ENST00000253251 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.22
UBE4B-201ENST00000253251 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.22
UBE4B-201ENST00000253251 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.22
UBE4B-201ENST00000253251 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 RASA1P20936 1047 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 PANX2Q96RD6 677 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 CDC25AP30304 524 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
UBE4B-201ENST00000253251 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 MEIS1O00470 390 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 DAPK3O43293 454 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 FAM169AQ9Y6X4 670 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 TBX3O15119 743 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 CNGA1P29973 690 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 STIM2Q9P246 746 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 ANKFY1Q9P2R3 1169 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 KCNV1Q6PIU1 500 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 RAVER2Q9HCJ3 691 aaKnown RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 FAM196BA6NMK8 535 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 NSFP46459 744 aaKnown RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 ANTXR2P58335 489 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 LRRC41Q15345 812 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 GTF3C2Q8WUA4 911 aaPredicted RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 RUNDC3BQ96NL0 473 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 INO80BQ9C086 356 aaPredicted RBP16.38■□□□□ 0.21
UBE4B-201ENST00000253251 IFT122Q9HBG6 1241 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 OGFRQ9NZT2 677 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 AKT3Q9Y243 479 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
UBE4B-201ENST00000253251 ESYT2A0FGR8 921 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
UBE4B-201ENST00000253251 BRD3Q15059 726 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 SMYD4Q8IYR2 804 aaPredicted RBP16.37■□□□□ 0.21
UBE4B-201ENST00000253251 RASA3Q14644 834 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 MTERF2Q49AM1 385 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 TCP11X2Q5H9J9 407 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 DAAM2Q86T65 1068 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 CCDC25Q86WR0 208 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 GRK7Q8WTQ7 553 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 NDST4Q9H3R1 872 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 INTS8Q75QN2 995 aaKnown RBP16.37■□□□□ 0.21
UBE4B-201ENST00000253251 TEX2Q8IWB9 1127 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.37■□□□□ 0.21
UBE4B-201ENST00000253251 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 E7EVH7 732 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 GBP1P32455 592 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 TGFB2P61812 414 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 IGBP1P78318 339 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 RNF187Q5TA31 235 aaPredicted RBP16.37■□□□□ 0.21
UBE4B-201ENST00000253251 TIPINQ9BVW5 301 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
UBE4B-201ENST00000253251 NBPF11Q86T75 865 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 ZHX1Q9UKY1 873 aaPredicted RBP16.36■□□□□ 0.21
UBE4B-201ENST00000253251 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 MXI1P50539 228 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 CTTNQ14247 550 aaKnown RBP16.36■□□□□ 0.21
UBE4B-201ENST00000253251 KCNB1Q14721 858 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
UBE4B-201ENST00000253251 FAM76AQ8TAV0 307 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 UBLCP1Q8WVY7 318 aaPredicted RBP16.36■□□□□ 0.21
UBE4B-201ENST00000253251 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 RAB20Q9NX57 234 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 ASIC3Q9UHC3 531 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
UBE4B-201ENST00000253251 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms