RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ANXA13P27216 316 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CASP14P31944 242 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PDE6BP35913 854 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PRCPP42785 496 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 GSTO1P78417 241 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 NBPF9Q3BBW0 867 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TDRD12Q587J7 1177 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 EMC10Q5UCC4 262 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PPP4R3AQ6IN85 833 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 MAATS1Q7Z4T9 603 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SLF2Q8IX21 1173 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 NOC4LQ9BVI4 516 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PLVAPQ9BX97 442 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CNOT10Q9H9A5 744 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 C6orf50Q9HD87 102 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 HDAC9Q9UKV0 1011 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CAPN11Q9UMQ6 739 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 hCG_1984214I3L0E3 225 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PJA2O43164 708 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 RPN1P04843 607 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 GNGT1P63211 74 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PTPN21Q16825 1174 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SND1Q7KZF4 910 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CSGALNACT2Q8N6G5 542 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF713Q8N859 430 aaPredicted RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CCHCR1Q8TD31 782 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 BCAS4Q8TDM0 211 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 DYNLL2Q96FJ2 89 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC114Q96M63 670 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 RUNDC3BQ96NL0 473 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TMEM51Q9NW97 253 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 BZW2Q9Y6E2 419 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SSC5DA1L4H1 1573 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 EPHB6O15197 1021 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ZBTB24O43167 697 aaPredicted RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 LPXNO60711 386 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 GUCY2CP25092 1073 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 STX17P56962 302 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TRAF1Q13077 416 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 STXBP4Q6ZWJ1 553 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 KCNK18Q7Z418 384 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 BLIDQ8IZY5 108 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF526Q8TF50 670 aaPredicted RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 IFT74Q96LB3 600 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 DESI2Q9BSY9 194 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 VPS16Q9H269 839 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 KCTD10Q9H3F6 313 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PRKAG2Q9UGJ0 569 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PARP2Q9UGN5 583 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 GGA2Q9UJY4 613 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SYNPO2Q9UMS6 1093 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 DAGLAQ9Y4D2 1042 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 MYH11P35749 1972 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 NDC80O14777 642 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CHUKO15111 745 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PRPF6O94906 941 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ERCC3P19447 782 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 MAGEA1P43355 309 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 NEDD9Q14511 834 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 HLTFQ14527 1009 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SKIV2LQ15477 1246 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PPP1R18Q6NYC8 613 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 BTNL9Q6UXG8 535 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TRMT44Q8IYL2 757 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 MMGT1Q8N4V1 131 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 EIF1ADQ8N9N8 165 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SLC44A5Q8NCS7 719 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ETNPPLQ8TBG4 499 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 GJD4Q96KN9 370 aaPredicted RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 IRX2Q9BZI1 471 aaPredicted RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 USP20Q9Y2K6 914 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 DAAM1Q9Y4D1 1078 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 ZMYM2Q9UBW7 1377 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 USP17L3A6NCW0 530 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 USP17L4A6NCW7 530 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 SOWAHDA6NJG2 315 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TLR2O60603 784 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CCT6AP40227 531 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 EIF3BP55884 814 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 BIRC3Q13489 604 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CUL1Q13616 776 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 RRP1BQ14684 758 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC40Q4G0X9 1142 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC38Q502W7 563 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 USP17L1Q7RTZ2 530 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TEX2Q8IWB9 1127 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 NUDT12Q9BQG2 462 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 IDI2Q9BXS1 227 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 IFIH1Q9BYX4 1025 aaKnown RBP4.57□□□□□ -1.68
UBE4A-201ENST00000252108 RIC8AQ9NPQ8 531 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 TAB2Q9NYJ8 693 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 MINDY4BA8MYZ0 360 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 STK25O00506 426 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 TFRCP02786 760 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 ASIC1P78348 528 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PSMD2Q13200 908 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 FAM98CQ17RN3 349 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 MSL1Q68DK7 614 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SV2BQ7L1I2 683 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 MB21D1Q8N884 522 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms