RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 USP17L20D6RJB6 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 GNA14O95837 355 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 SSBP05455 408 aaKnown RBP eCLIP23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 MAGEA1P43355 309 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 AARSP49588 968 aaKnown RBP eCLIP23.91■■□□□ 1.429e-7■■■■□ 24
SH2D3A-201ENST00000245908 USP17L24Q0WX57 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 HSP90B2PQ58FF3 399 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L6PQ6QN14 398 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 PLCD3Q8N3E9 789 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 MMGT1Q8N4V1 131 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 DCAF4Q8WV16 495 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 SYN2Q92777 582 aaPredicted RBP23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 MKL1Q969V6 931 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 ALS2CR12Q96Q35 445 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 ANO3Q9BYT9 981 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 NUCKS1Q9H1E3 243 aaKnown RBP23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 ERCC3P19447 782 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 C2orf54Q08AI8 447 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 CCDC102AQ96A19 550 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 POTEB3A0JP26 581 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 POTECB2RU33 542 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 RBAK-RBAKDNI3L0D1 243 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 POTEBQ6S5H4 581 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 MOXD1Q6UVY6 613 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 GPBP1Q86WP2 473 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 ZC3H3Q8IXZ2 948 aaKnown RBP23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 RASSF4Q9H2L5 321 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 PCDHA1Q9Y5I3 950 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 NOL4O94818 638 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 SLURP2P0DP57 97 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 CYP11B2P19099 503 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 LMAN1P49257 510 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 TRIM59Q8IWR1 403 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 ZFPM1Q8IX07 1006 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 NYAP2Q9P242 653 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 MYH10P35580 1976 aa23.9■■□□□ 1.42
SH2D3A-201ENST00000245908 FRMD3A2A2Y4 597 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 NPR1P16066 1061 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 TCP1P17987 556 aaKnown RBP23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 CRKP46108 304 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 CCNI2Q6ZMN8 369 aaPredicted RBP23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 OSBPL9Q96SU4 736 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 KCTD10Q9H3F6 313 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 CWC15Q9P013 229 aaKnown RBP23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 TBC1D7Q9P0N9 293 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 HPCAL4Q9UM19 191 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 HYOU1Q9Y4L1 999 aa23.89■■□□□ 1.42
SH2D3A-201ENST00000245908 EEF2P13639 858 aaKnown RBP23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 AP3B2Q13367 1082 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 CDC37Q16543 378 aaPredicted RBP23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 SLFN12Q8IYM2 578 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 COG1Q8WTW3 980 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 SCFD1Q8WVM8 642 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 RUBCNQ92622 972 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 ZDHHC15Q96MV8 337 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 AFF2P51816 1311 aa23.89■■□□□ 1.41
SH2D3A-201ENST00000245908 SLC1A4P43007 532 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 TNNT3P45378 269 aaPredicted RBP23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 GFPT1Q06210 699 aaPredicted RBP23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 HERC4Q5GLZ8 1057 aaPredicted RBP23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 FAM83BQ5T0W9 1011 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 MEX3CQ5U5Q3 659 aaKnown RBP23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 CCDC70Q6NSX1 233 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 CRYGNQ8WXF5 182 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 SALL4Q9UJQ4 1053 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 PITPNM2Q9BZ72 1349 aa23.88■■□□□ 1.41
SH2D3A-201ENST00000245908 NPHP3-ACAD11A0A0J9YXS1 232 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 MED24O75448 989 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 SERPING1P05155 500 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 ZSCAN26Q16670 478 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 SLC9C1Q4G0N8 1177 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 SFMBT2Q5VUG0 894 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 SLFN13Q68D06 897 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 NELFCDQ8IXH7 590 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 RNF10Q8N5U6 811 aaKnown RBP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 DRC1Q96MC2 740 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 LSM14BQ9BX40 385 aaKnown RBP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 DHX36Q9H2U1 1008 aaKnown RBP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 NLRC4Q9NPP4 1024 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 MEIS2O14770 477 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 TLR2O60603 784 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 SLC12A3P55017 1021 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 TDRD12Q587J7 1177 aaKnown RBP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 GPIHBP1Q8IV16 184 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 KANSL2Q9H9L4 492 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 EMILIN3Q9NT22 766 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 FAM184BQ9ULE4 1060 aa23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 ZC3H4Q9UPT8 1303 aaKnown RBP23.87■■□□□ 1.41
SH2D3A-201ENST00000245908 COL11A2P13942 1736 aaPredicted RBP23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 ZMYND10O75800 440 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 MYBL2P10244 700 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 PPP4R3CPQ6ZMV5 832 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 G3V3G9 751 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 STAT3P40763 770 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 CACNB1Q02641 598 aaPredicted RBP23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 RASSF7Q02833 373 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 EDRF1Q3B7T1 1238 aa23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 CERKLQ49MI3 558 aaPredicted RBP23.86■■□□□ 1.41
SH2D3A-201ENST00000245908 ARSHQ5FYA8 562 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms