RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ITIH6Q6UXX5 1313 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 KRT19P08727 400 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 BMP3P12645 472 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 LACTBP83111 547 aaPredicted RBP10.13□□□□□ -0.79
COL21A1-201ENST00000244728 CALCOCO2Q13137 446 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 DGKHQ86XP1 1220 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 ANKRD35Q8N283 1001 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 TACO1Q9BSH4 297 aaKnown RBP10.13□□□□□ -0.79
COL21A1-201ENST00000244728 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 AGPAT5Q9NUQ2 364 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 PI4KBQ9UBF8 816 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 A0A0U1RQJ8 604 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 POTEMA6NI47 508 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 STRN3Q13033 797 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 TBX2Q13207 712 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 NEDD9Q14511 834 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 INTS13Q9NVM9 706 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 GUCY1A3Q02108 690 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 SEPT2Q15019 361 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 ASPRV1Q53RT3 343 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 MGARPQ8TDB4 240 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 NCAPGQ9BPX3 1015 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 MXD3Q9BW11 206 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 CAPN11Q9UMQ6 739 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 RGS16O15492 202 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 TOB1P50616 345 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 GPSM2P81274 684 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 ALX1Q15699 326 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 ARL6IP4Q66PJ3 421 aaKnown RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 DENND2CQ68D51 928 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 GALNT17Q6IS24 598 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 NAP1L3Q99457 506 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 TMEM260Q9NX78 707 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
COL21A1-201ENST00000244728 MRPL11Q9Y3B7 192 aaKnown RBP10.12□□□□□ -0.79
COL21A1-201ENST00000244728 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CCDC6Q16204 474 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ZNF34Q8IZ26 560 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 PPM1KQ8N3J5 372 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 METTL13Q8N6R0 699 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 TCP11Q8WWU5 503 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 RAB21Q9UL25 225 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 NOVA2Q9UNW9 492 aaKnown RBP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 PLAAQ9Y263 795 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 K7ENM7 598 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 MAP2K7O14733 419 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 EIF3HO15372 352 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ZBTB7AO95365 584 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CSF1RP07333 972 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 NR2F2P24468 414 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 STAT1P42224 750 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 IFNAR2P48551 515 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ATP2C1P98194 919 aaPredicted RBP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ACTN3Q08043 901 aaPredicted RBP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 TRPC3Q13507 836 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 N4BP2L2Q92802 583 aaPredicted RBP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CUEDC2Q9H467 287 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 AZI2Q9H6S1 392 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 LARSQ9P2J5 1176 aaKnown RBP10.11□□□□□ -0.79
COL21A1-201ENST00000244728 SNX12Q9UMY4 172 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 STK38LQ9Y2H1 464 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 RABGAP1Q9Y3P9 1069 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 A0A1W2PQC6 194 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 PSMD14O00487 310 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CHUKO15111 745 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 BMP6P22004 513 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 GUCY2CP25092 1073 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CHRNA5P30532 468 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 SLC20A2Q08357 652 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 WDR93Q6P2C0 686 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 LINC00116Q8NCU8 138 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 COA1Q9GZY4 146 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 RNF14Q9UBS8 474 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 AMFRQ9UKV5 643 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 LRRC53A6NM62 1247 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 NPR1P16066 1061 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 KLRK1P26718 216 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 AOC3Q16853 763 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 GADL1Q6ZQY3 521 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 ZNF354CQ86Y25 554 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 FBF1Q8TES7 1133 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 RAB17Q9H0T7 212 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 PCIF1Q9H4Z3 704 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 MAGEF1Q9HAY2 307 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 CSADQ9Y600 493 aa10.11□□□□□ -0.79
COL21A1-201ENST00000244728 HMGB1P1B2RPK0 211 aaPredicted RBP10.1□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L10C9JJH3 530 aa10.1□□□□□ -0.79
COL21A1-201ENST00000244728 CTNND1O60716 968 aaKnown RBP10.1□□□□□ -0.79
COL21A1-201ENST00000244728 MYL1P05976 194 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms