RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GPRC5DQ9NZD1 345 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 PES1O00541 588 aaKnown RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 RIOK3O14730 519 aaKnown RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 VCAM1P19320 739 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 MTIF2P46199 727 aaKnown RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 PPP2R5CQ13362 524 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 WDR11Q9BZH6 1224 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 TUFT1Q9NNX1 390 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 PICK1Q9NRD5 415 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 PPP1R9AQ9ULJ8 1098 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 CTDP1Q9Y5B0 961 aaPredicted RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 PSMD10O75832 226 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 FLOT1O75955 427 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 EIF2AK1Q9BQI3 630 aaKnown RBP25.86■■□□□ 1.73
MSX2-201ENST00000239243 PPP2R2CQ9Y2T4 447 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 FRMD3A2A2Y4 597 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 MUTP22033 750 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 FECHP22830 423 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 FXR1P51114 621 aaKnown RBP eCLIP25.86■■□□□ 1.73
MSX2-201ENST00000239243 OTOP1Q7RTM1 612 aa25.86■■□□□ 1.73
MSX2-201ENST00000239243 MEIS1O00470 390 aa25.85■■□□□ 1.73
MSX2-201ENST00000239243 LMNB1P20700 586 aa25.85■■□□□ 1.73
MSX2-201ENST00000239243 EMILIN3Q9NT22 766 aa25.85■■□□□ 1.73
MSX2-201ENST00000239243 DICER1Q9UPY3 1922 aaKnown RBP25.85■■□□□ 1.73
MSX2-201ENST00000239243 GAS7O60861 476 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 ZBED4O75132 1171 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 BACE1P56817 501 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 HERC4Q5GLZ8 1057 aaPredicted RBP25.84■■□□□ 1.73
MSX2-201ENST00000239243 WRNIP1Q96S55 665 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 NUP58Q9BVL2 599 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 RPAP3Q9H6T3 665 aaPredicted RBP25.84■■□□□ 1.73
MSX2-201ENST00000239243 ABHD10Q9NUJ1 306 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 RETREG2Q8NC44 543 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 CLEC4DQ8WXI8 215 aa25.84■■□□□ 1.73
MSX2-201ENST00000239243 NOC4LQ9BVI4 516 aaKnown RBP25.84■■□□□ 1.73
MSX2-201ENST00000239243 RPTORQ8N122 1335 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 SPP2Q13103 211 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 FKBP15Q5T1M5 1219 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 TMTC1Q8IUR5 882 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 REXO1L1PQ8IX06 675 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 ZNF280CQ8ND82 737 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 IQCDQ96DY2 449 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 ZNF577Q9BSK1 485 aa25.83■■□□□ 1.73
MSX2-201ENST00000239243 RBBP6Q7Z6E9 1792 aaKnown RBP25.83■■□□□ 1.73
MSX2-201ENST00000239243 B4DLN1 442 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 EYA4O95677 639 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 BCRP11274 1271 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 ALAS1P13196 640 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 UBXN2AP68543 259 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 PABPC4Q13310 644 aaKnown RBP eCLIP25.83■■□□□ 1.72
MSX2-201ENST00000239243 ARSHQ5FYA8 562 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 NIPA1Q7RTP0 329 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 CPXCR1Q8N123 301 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 HSD17B14Q9BPX1 270 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 MXRA8Q9BRK3 442 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 PCDHA2Q9Y5H9 948 aa25.83■■□□□ 1.72
MSX2-201ENST00000239243 EML1O00423 815 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 CCDC175P0C221 793 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 TBC1D8BQ0IIM8 1120 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 TRPM4Q8TD43 1214 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 RAVER2Q9HCJ3 691 aaKnown RBP25.82■■□□□ 1.72
MSX2-201ENST00000239243 NFIBO00712 420 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 PTPRAP18433 802 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 PSMC6P62333 389 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 ETF1P62495 437 aaKnown RBP25.82■■□□□ 1.72
MSX2-201ENST00000239243 CYP4A11Q02928 519 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 LRRC41Q15345 812 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 ARHGAP27Q6ZUM4 889 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 UPF1Q92900 1129 aaKnown RBP eCLIP25.82■■□□□ 1.72
MSX2-201ENST00000239243 RIT2Q99578 217 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 TEKT3Q9BXF9 490 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 GGA3Q9NZ52 723 aa25.82■■□□□ 1.72
MSX2-201ENST00000239243 KRT9P35527 623 aa25.81■■□□□ 1.72
MSX2-201ENST00000239243 FKBP3Q00688 224 aaKnown RBP25.81■■□□□ 1.72
MSX2-201ENST00000239243 GIT2Q14161 759 aa25.81■■□□□ 1.72
MSX2-201ENST00000239243 LUC7L2Q9Y383 392 aaKnown RBP25.81■■□□□ 1.72
MSX2-201ENST00000239243 C19orf81C9J6K1 198 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 ZCWPW2Q504Y3 356 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 CYP26C1Q6V0L0 522 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 TOGARAM2Q6ZUX3 1019 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 C12orf42Q96LP6 360 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 CAPN11Q9UMQ6 739 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 PHLPP2Q6ZVD8 1323 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 NPHP3-ACAD11A0A0J9YXS1 232 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 SOWAHDA6NJG2 315 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 MAN2A1Q16706 1144 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 TSR1Q2NL82 804 aaKnown RBP25.8■■□□□ 1.72
MSX2-201ENST00000239243 SUPT20HL1Q3ZLR7 823 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 MIIPQ5JXC2 388 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 LRRC55Q6ZSA7 311 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 EEF2KMTQ96G04 330 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 ERGIC2Q96RQ1 377 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 BHMT2Q9H2M3 363 aa25.8■■□□□ 1.72
MSX2-201ENST00000239243 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.8■■□□□ 1.72
MSX2-201ENST00000239243 IPO5O00410 1097 aaKnown RBP25.79■■□□□ 1.72
MSX2-201ENST00000239243 GLIS3Q8NEA6 775 aa25.79■■□□□ 1.72
MSX2-201ENST00000239243 NEK9Q8TD19 979 aa25.79■■□□□ 1.72
MSX2-201ENST00000239243 ZKSCAN4Q969J2 545 aaPredicted RBP25.79■■□□□ 1.72
MSX2-201ENST00000239243 CEP63Q96MT8 703 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms