RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 GDF6Q6KF10 455 aaPredicted RBP9.79□□□□□ -0.84
IFT43-201ENST00000238628 BTNL9Q6UXG8 535 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 FIBCD1Q8N539 461 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 DBF4BQ8NFT6 615 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
IFT43-201ENST00000238628 GPCPD1Q9NPB8 672 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
IFT43-201ENST00000238628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
IFT43-201ENST00000238628 MYH7BA7E2Y1 1941 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 VPS13AQ96RL7 3174 aa9.79□□□□□ -0.84
IFT43-201ENST00000238628 FRMPD2Q68DX3 1309 aaPredicted RBP9.79□□□□□ -0.84
IFT43-201ENST00000238628 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 C5orf67F2Z3F1 127 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 ATF7P17544 494 aaPredicted RBP9.78□□□□□ -0.84
IFT43-201ENST00000238628 SDHBP21912 280 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 SP100P23497 879 aaPredicted RBP9.78□□□□□ -0.84
IFT43-201ENST00000238628 BMPR1AP36894 532 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 NOVP48745 357 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 RPS6P62753 249 aaKnown RBP9.78□□□□□ -0.84
IFT43-201ENST00000238628 SLC30A10Q6XR72 485 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 DCLK2Q8N568 766 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 EFHBQ8N7U6 833 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 FLCNQ8NFG4 579 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 RUBCNQ92622 972 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 TOP1MTQ969P6 601 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 TMEM47Q9BQJ4 181 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 TOMM22Q9NS69 142 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 TTC41PQ6P2S7 1318 aa9.78□□□□□ -0.84
IFT43-201ENST00000238628 USP24Q9UPU5 2620 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 GPR179Q6PRD1 2367 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 BRD1O95696 1058 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
IFT43-201ENST00000238628 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
IFT43-201ENST00000238628 RBL2Q08999 1139 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 RRP12Q5JTH9 1297 aaKnown RBP9.77□□□□□ -0.85
IFT43-201ENST00000238628 ZNF618Q5T7W0 954 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 RBM23Q86U06 439 aaKnown RBP9.77□□□□□ -0.85
IFT43-201ENST00000238628 IL17RAQ96F46 866 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
IFT43-201ENST00000238628 ANAPC4Q9UJX5 808 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 SORCS3Q9UPU3 1222 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 RWDD3Q9Y3V2 267 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 R4GN57 208 aa9.77□□□□□ -0.85
IFT43-201ENST00000238628 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 ATG2AQ2TAZ0 1938 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 KIAA1217Q5T5P2 1943 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 ORC4O43929 436 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 ARIH2O95376 493 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 MMP1P03956 469 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 FGRP09769 529 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 CASTP20810 708 aaKnown RBP9.76□□□□□ -0.85
IFT43-201ENST00000238628 EDNRBP24530 442 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 NRIP1P48552 1158 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 DMWDQ09019 674 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
IFT43-201ENST00000238628 MBTPS1Q14703 1052 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 SEPT14Q6ZU15 432 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 CCDC105Q8IYK2 499 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 MIER1Q8N108 512 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 PI4K2BQ8TCG2 481 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 AFG1LQ8WV93 481 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 EMSYQ7Z589 1322 aa9.76□□□□□ -0.85
IFT43-201ENST00000238628 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
IFT43-201ENST00000238628 RALGAPA2Q2PPJ7 1873 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 OTOGLQ3ZCN5 2332 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 FOXP2O15409 715 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 GH1P01241 217 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 MMP3P08254 477 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 ADRB1P08588 477 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 PDHBP11177 359 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 PTK7Q13308 1070 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 LY6KQ17RY6 165 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 VPS53Q5VIR6 699 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 DTWD2Q8NBA8 298 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 SUSD6Q92537 303 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 ALG1Q9BT22 464 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
IFT43-201ENST00000238628 MYH6P13533 1939 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 DCDC2BA2VCK2 349 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 PI15O43692 258 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 GLP2RO95838 553 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 FGAP02671 866 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 ZNF543Q08ER8 600 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 CAMK1Q14012 370 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 ALX1Q15699 326 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 STXBP2Q15833 593 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 USH1GQ495M9 461 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms