RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MX2P20592 715 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
VAMP4-201ENST00000236192 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-201ENST00000236192 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 HSPA6P17066 643 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 HSD17B3P37058 310 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 MMEL1Q495T6 779 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 TNNI3KQ59H18 835 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 WASHC2DQ5SRD0 308 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 LRGUKQ96M69 825 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 TRAIPQ9BWF2 469 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 ISCUQ9H1K1 167 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 C10orf88Q9H8K7 445 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 FPGT-TNNI3KV9GXZ4 949 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 H2AFZP0C0S5 128 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 H2AFVQ71UI9 128 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 LBRQ14739 615 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 TMED2Q15363 201 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 ATP2A3Q93084 1043 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 NMD3Q96D46 503 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 STK10O94804 968 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 ATP6V1C1P21283 382 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 CALB2P22676 271 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 STK32AQ8WU08 396 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 DKK3Q9UBP4 350 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 ECEL1O95672 775 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 GNA14O95837 355 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 IL13P35225 146 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 TMCO4Q5TGY1 634 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 LINS1Q8NG48 757 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 ESR2Q92731 530 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 CHP1Q99653 195 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
VAMP4-201ENST00000236192 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
VAMP4-201ENST00000236192 WDR46O15213 610 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 ADCY8P40145 1251 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 SCNN1BP51168 640 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 MTTPP55157 894 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 DMPKQ09013 629 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 RGS9BPQ6ZS82 235 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 TRIM55Q9BYV6 548 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 MGRN1O60291 552 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 SERPING1P05155 500 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 POLR2FP61218 127 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 LACTB2Q53H82 288 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 U2AF1L4Q8WU68 220 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 LENG1Q96BZ8 264 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 PPP1R14BQ96C90 147 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 EPAS1Q99814 870 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 PSMD6Q15008 389 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 RCN1Q15293 331 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 MDM1Q8TC05 714 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 TSNARE1Q96NA8 513 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 APOEP02649 317 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 ERICH1Q86X53 443 aa13.91□□□□□ -0.18
VAMP4-201ENST00000236192 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 PACSIN2Q9UNF0 486 aaPredicted RBP13.91□□□□□ -0.18
VAMP4-201ENST00000236192 DPPA5A6NC42 116 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 BTBD18B2RXH4 712 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 GYPCP04921 128 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 ATF2P15336 505 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PLCB3Q01970 1234 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 OCA2Q04671 838 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 FMR1Q06787 632 aaKnown RBP eCLIP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 ZNF589Q86UQ0 364 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 DDHD1Q8NEL9 900 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 THAP11Q96EK4 314 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 TRIM11Q96F44 468 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 SH3GL2Q99962 352 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PODXLO00592 558 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 BRAFP15056 766 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 B4E1Z4 1266 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 NCAPHQ15003 741 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms