RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 TRIM50Q86XT4 487 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 MYLIPQ8WY64 445 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 GPRASP2Q96D09 838 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 EHMT1Q9H9B1 1298 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 SLC4A7Q9Y6M7 1214 aa16.3■□□□□ 0.2
GPN3-201ENST00000228827 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 H3BRB1 525 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 hCG_1984214I3L0E3 225 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 ATP9AO75110 1047 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 PFKMP08237 780 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 RFC2P35250 354 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 ZNF713Q8N859 430 aaPredicted RBP16.29■□□□□ 0.2
GPN3-201ENST00000228827 WNT8BQ93098 351 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 PHKBQ93100 1093 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
GPN3-201ENST00000228827 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 TMEM265A0A087WTH1 108 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 CKBP12277 381 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 SELPP16109 830 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 KCNA2P16389 499 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 RABGGTBP53611 331 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
GPN3-201ENST00000228827 PTK7Q13308 1070 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 MTMR1Q13613 665 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
GPN3-201ENST00000228827 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 ANO3Q9BYT9 981 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 ZNF576Q9H609 170 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 MSRAQ9UJ68 235 aa16.29■□□□□ 0.2
GPN3-201ENST00000228827 C17orf102A2RUQ5 167 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 ACTN1P12814 892 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 SCG2P13521 617 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 GIMAP8Q8ND71 665 aaPredicted RBP16.28■□□□□ 0.2
GPN3-201ENST00000228827 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
GPN3-201ENST00000228827 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
GPN3-201ENST00000228827 NKX2-4Q9H2Z4 354 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
GPN3-201ENST00000228827 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 JADE2Q9NQC1 790 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
GPN3-201ENST00000228827 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
GPN3-201ENST00000228827 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 FOSP01100 380 aaPredicted RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 ATP2A2P16615 1042 aaKnown RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 PDIA3P30101 505 aaKnown RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 RAB30Q15771 203 aa16.27■□□□□ 0.19
GPN3-201ENST00000228827 TRIM71Q2Q1W2 868 aaKnown RBP16.27■□□□□ 0.19
GPN3-201ENST00000228827 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.19
GPN3-201ENST00000228827 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.19
GPN3-201ENST00000228827 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.19
GPN3-201ENST00000228827 NID2Q14112 1375 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 TREHO43280 583 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 PRPF3O43395 683 aaKnown RBP16.26■□□□□ 0.19
GPN3-201ENST00000228827 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
GPN3-201ENST00000228827 MYOGP15173 224 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 FOSL2P15408 326 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 THPOP40225 353 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
GPN3-201ENST00000228827 GPNMBQ14956 572 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 PKN1Q16512 942 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 MXRA8Q9BRK3 442 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 RNPEPQ9H4A4 650 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 SETD4Q9NVD3 440 aa16.26■□□□□ 0.19
GPN3-201ENST00000228827 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
GPN3-201ENST00000228827 ADAMTS3O15072 1205 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 NBNO60934 754 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 ARP10275 920 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 MARK3P27448 753 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 ZNF76P36508 570 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 CLK2P49760 499 aaKnown RBP16.25■□□□□ 0.19
GPN3-201ENST00000228827 RBL2Q08999 1139 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 AP3B2Q13367 1082 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 SEPT1Q8WYJ6 367 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 KCNH7Q9NS40 1196 aa16.25■□□□□ 0.19
GPN3-201ENST00000228827 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 ARHGAP4P98171 946 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 STK3Q13188 491 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 NTRK3Q16288 839 aa16.24■□□□□ 0.19
GPN3-201ENST00000228827 TRAF7Q6Q0C0 670 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms