RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 WTIPA6NIX2 430 aaPredicted RBP14.99□□□□□ -0.01
NFKB1-201ENST00000226574 K7ENM7 598 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 ALDH3A1P30838 453 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 KCNH2Q12809 1159 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 CERKLQ49MI3 558 aaPredicted RBP14.99□□□□□ -0.01
NFKB1-201ENST00000226574 CCNI2Q6ZMN8 369 aaPredicted RBP14.99□□□□□ -0.01
NFKB1-201ENST00000226574 IFT74Q96LB3 600 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 BRIP1Q9BX63 1249 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 ADAM33Q9BZ11 813 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 RBM12Q9NTZ6 932 aaKnown RBP14.99□□□□□ -0.01
NFKB1-201ENST00000226574 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 SNX12Q9UMY4 172 aa14.99□□□□□ -0.01
NFKB1-201ENST00000226574 NPHP3-ACAD11A0A0J9YXS1 232 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 THAP12O43422 761 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 CTTNQ14247 550 aaKnown RBP14.98□□□□□ -0.01
NFKB1-201ENST00000226574 HHATQ5VTY9 493 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 DCUN1D2Q6PH85 259 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 FBXO11Q86XK2 927 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 RBM17Q96I25 401 aaKnown RBP14.98□□□□□ -0.01
NFKB1-201ENST00000226574 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 KDM3AQ9Y4C1 1321 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 ERVV-1B6SEH8 477 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 PCP11498 1178 aaKnown RBP14.98□□□□□ -0.01
NFKB1-201ENST00000226574 CD19P15391 556 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 ICA1Q05084 483 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 POTEGQ6S5H5 508 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 POTEEQ6S8J3 1075 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 FMO2Q99518 471 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 SERPINB13Q9UIV8 391 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 XDHP47989 1333 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 LAD1O00515 517 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 ACTN1P12814 892 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 TRIM28Q13263 835 aaKnown RBP14.98□□□□□ -0.01
NFKB1-201ENST00000226574 CCDC38Q502W7 563 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 PPP1R21Q6ZMI0 780 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
NFKB1-201ENST00000226574 HOMER3Q9NSC5 361 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
NFKB1-201ENST00000226574 A0A087X0B3 334 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 GOLGA8IPA6NC78 632 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 GOLGA8JA6NMD2 632 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 DAPK3O43293 454 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 HDLBPQ00341 1268 aaKnown RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 WDR44Q5JSH3 913 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 ALS2CLQ60I27 953 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 CCDC197Q8NCU1 140 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 IQCDQ96DY2 449 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 ADGRB2O60241 1585 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 IRAK1P51617 712 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 APBA1Q02410 837 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 SNCBQ16143 134 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 C6orf163Q5TEZ5 329 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 UNC13DQ70J99 1090 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 EHD4Q9H223 541 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 GAS8O95995 478 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 CSF1RP07333 972 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 AGXT2Q9BYV1 514 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 TRIM7Q9C029 511 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 STK17AQ9UEE5 414 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 HPCAL4Q9UM19 191 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 TROAPQ12815 778 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 LRRC14Q15048 493 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 FAM102BQ5T8I3 360 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 PAXIP1Q6ZW49 1069 aaPredicted RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 KIFAP3Q92845 792 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 ANKZF1Q9H8Y5 726 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 INTS13Q9NVM9 706 aa14.97□□□□□ -0.01
NFKB1-201ENST00000226574 CHORDC1Q9UHD1 332 aaPredicted RBP14.97□□□□□ -0.01
NFKB1-201ENST00000226574 NCAPD2Q15021 1401 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 DEPDC5O75140 1603 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 ANO9A1A5B4 782 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 TMOD1P28289 359 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 PRKG1Q13976 671 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 CCDC13Q8IYE1 715 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 TEKT1Q969V4 418 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 DBNDD1Q9H9R9 158 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 UBE2TQ9NPD8 197 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-201ENST00000226574 BSDC1Q9NW68 430 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-201ENST00000226574 CAPN6Q9Y6Q1 641 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 MROH2AA6NES4 1674 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 TESPA1A2RU30 521 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-201ENST00000226574 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-201ENST00000226574 DESP17661 470 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 SMTNP53814 917 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 HP1BP3Q5SSJ5 553 aaPredicted RBP14.96□□□□□ -0.01
NFKB1-201ENST00000226574 SFR1Q86XK3 245 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 CTAGE3PQ8IX95 158 aa14.96□□□□□ -0.01
NFKB1-201ENST00000226574 KLHL14Q9P2G3 628 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms