RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 AFPP02771 609 aaKnown RBP13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 RDXP35241 583 aaKnown RBP13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 STAT2P52630 851 aa13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 PMS1P54277 932 aaKnown RBP13.56□□□□□ -0.24
TM9SF4-201ENST00000217315 FUT2Q10981 343 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 FAM71BQ8TC56 605 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 KRT12Q99456 494 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 MED4Q9NPJ6 270 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 KBTBD4Q9NVX7 518 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 SPOPO43791 374 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 SLC37A4O43826 429 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 FAM83BQ5T0W9 1011 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 NAA35Q5VZE5 725 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 CDC42EP5Q6NZY7 148 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 CCDC25Q86WR0 208 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 GJA3Q9Y6H8 435 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 EIF3CLB5ME19 914 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 FAM186BQ8IYM0 893 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 EIF3CQ99613 913 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 ADAM21Q9UKJ8 722 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 K7ENM7 598 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 ATP2C2O75185 946 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 SERPING1P05155 500 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 KRT5P13647 590 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 PPFIA1Q13136 1202 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 PDIA5Q14554 519 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 ZNF577Q9BSK1 485 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 CCPG1Q9ULG6 757 aa13.55□□□□□ -0.24
TM9SF4-201ENST00000217315 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 ZNF185O15231 689 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 RNF40O75150 1001 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NEFHP12036 1026 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 GYS1P13807 737 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 SMTNP53814 917 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 ORC2Q13416 577 aaPredicted RBP13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 SH3RF1Q7Z6J0 888 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 CCDC127Q96BQ5 260 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 KRIT1O00522 736 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NDUFAB1O14561 156 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 DAGLBQ8NCG7 672 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 RASAL2Q9UJF2 1139 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NCK2O43639 380 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 LRRN2O75325 713 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 GFPT2O94808 682 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 BCRP11274 1271 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NFIAQ12857 509 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 BIRC3Q13489 604 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 PROM2Q8N271 834 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 TEKT3Q9BXF9 490 aa13.54□□□□□ -0.24
TM9SF4-201ENST00000217315 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 ATP1A2P50993 1020 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 E2F4Q16254 413 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 AOC3Q16853 763 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 NIM1KQ8IY84 436 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 C21orf2O43822 256 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 ECE2O60344 883 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 TFRCP02786 760 aaKnown RBP13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 SEMA3FQ13275 785 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 ALKBH5Q6P6C2 394 aaKnown RBP13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
TM9SF4-201ENST00000217315 A0A0U1RQJ8 604 aa13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 SYCE1Q8N0S2 351 aa13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 PCIF1Q9H4Z3 704 aa13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 UTP11Q9Y3A2 253 aaKnown RBP13.52□□□□□ -0.24
TM9SF4-201ENST00000217315 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 SORBS3O60504 671 aa13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 PLEKP08567 350 aaPredicted RBP13.52□□□□□ -0.25
TM9SF4-201ENST00000217315 MYZAPP0CAP1 466 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms