RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KCNB1Q14721 858 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 SRLQ86TD4 932 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 CREG2Q8IUH2 290 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 TSPYL1Q9H0U9 437 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 SNX12Q9UMY4 172 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 TMEM110-MUSTN1A8MSY1 372 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 EIF3CLB5ME19 914 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 GLI1P08151 1106 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 CKAP4Q07065 602 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 RAD54LQ92698 747 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 EIF3CQ99613 913 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 ATP8B1O43520 1251 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 HEXIM1O94992 359 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
EFNB1-201ENST00000204961 NR2F2P24468 414 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 KCNMA1Q12791 1236 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 SFMBT2Q5VUG0 894 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 GOLGA5Q8TBA6 731 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 BCAS4Q8TDM0 211 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 NID2Q14112 1375 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
EFNB1-201ENST00000204961 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 USP21Q9UK80 565 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 A0A1W2PQC6 194 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 SORBS3O60504 671 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 CASP4P49662 377 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 RHBDL3P58872 404 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 CTTNQ14247 550 aaKnown RBP16.62■□□□□ 0.25
EFNB1-201ENST00000204961 ARHGAP44Q17R89 818 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 DPH5Q9H2P9 285 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 GTF2A1P52655 376 aaPredicted RBP16.62■□□□□ 0.25
EFNB1-201ENST00000204961 SEPT2Q15019 361 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
EFNB1-201ENST00000204961 CCDC174Q6PII3 467 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 TRIM58Q8NG06 486 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 HAS1Q92839 578 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 NOX5Q96PH1 765 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 EMILIN3Q9NT22 766 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 EDIL3O43854 480 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 TLR2O60603 784 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 MED24O75448 989 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 TRIM37O94972 964 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 CFBP00751 764 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
EFNB1-201ENST00000204961 GUCY1A3Q02108 690 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 SLC10A5Q5PT55 438 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 TPH2Q8IWU9 490 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 PLAGL2Q9UPG8 496 aa16.61■□□□□ 0.25
EFNB1-201ENST00000204961 GCNT3O95395 438 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 MYBP10242 640 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 ZC2HC1CQ53FD0 456 aaPredicted RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 PHLDB2Q86SQ0 1253 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 GPATCH11Q8N954 259 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 DDX47Q9H0S4 455 aaKnown RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 MYO1AQ9UBC5 1043 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 JRKLQ9Y4A0 524 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 COL4A3BPQ9Y5P4 624 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 AGPSO00116 658 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 LRRN2O75325 713 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 SFR1Q86XK3 245 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 TLR10Q9BXR5 811 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 CYP2J2P51589 502 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 SEC24CP53992 1094 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 ODF2Q5BJF6 829 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 CUL5Q93034 780 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 FAM84AQ96KN4 292 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 LEMD3Q9Y2U8 911 aa16.6■□□□□ 0.25
EFNB1-201ENST00000204961 THRAP3Q9Y2W1 955 aaKnown RBP16.6■□□□□ 0.25
EFNB1-201ENST00000204961 KCNH2Q12809 1159 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
EFNB1-201ENST00000204961 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms