RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CHD4Q14839 1912 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 USP17L2Q6R6M4 530 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 ZNF444Q8N0Y2 327 aaPredicted RBP22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 RUBCNQ92622 972 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 LRRC4CQ9HCJ2 640 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 GRID2IPA4D2P6 1211 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 RASSF9O75901 435 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 PSEN1P49768 467 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 DDR1Q08345 913 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 NKX1-1Q15270 411 aaPredicted RBP22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 SLC35G1Q2M3R5 365 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 GKAP1Q5VSY0 366 aaPredicted RBP22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 NEK8Q86SG6 692 aa22.03■■□□□ 1.12
PPP1R3F-201ENST00000055335 SERPING1P05155 500 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 COPB2P35606 906 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 PPP2R5AQ15172 486 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 NAB2Q15742 525 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 UAP1Q16222 522 aaPredicted RBP22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 RPAINQ86UA6 219 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 LRRC45Q96CN5 670 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 LMTK3Q96Q04 1460 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 INPP4AQ96PE3 977 aaPredicted RBP22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 MMTAG2Q9BU76 263 aaKnown RBP22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.02■■□□□ 1.12
PPP1R3F-201ENST00000055335 STXBP3O00186 592 aa22.02■■□□□ 1.11
PPP1R3F-201ENST00000055335 PJA2O43164 708 aa22.02■■□□□ 1.11
PPP1R3F-201ENST00000055335 CTNND1O60716 968 aaKnown RBP22.02■■□□□ 1.11
PPP1R3F-201ENST00000055335 PPP2R2AP63151 447 aa22.02■■□□□ 1.11
PPP1R3F-201ENST00000055335 HVCN1Q96D96 273 aa22.02■■□□□ 1.11
PPP1R3F-201ENST00000055335 PAX7P23759 505 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 SCTRP47872 440 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 ASIC2Q16515 512 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 MEI1Q5TIA1 1274 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 RUFY4Q6ZNE9 571 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 RNF14Q9UBS8 474 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 ATP6V0A2Q9Y487 856 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 NUP188Q5SRE5 1749 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 TTI1O43156 1089 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 TNFRSF8P28908 595 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 IFNAR2P48551 515 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 CALCRLQ16602 461 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 FAM133BQ5BKY9 247 aaKnown RBP22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 ANKRD20A8PQ5CZ79 823 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 TCERG1LQ5VWI1 586 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 PPP4R3AQ6IN85 833 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 DZIP1Q86YF9 867 aaKnown RBP22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 BARHL2Q9NY43 387 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 MAD2L2Q9UI95 211 aa22.01■■□□□ 1.11
PPP1R3F-201ENST00000055335 ASTE1Q2TB18 679 aaPredicted RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 KCNK18Q7Z418 384 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 YTHDF3Q7Z739 585 aaKnown RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 TAX1BP1Q86VP1 789 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 CUEDC2Q9H467 287 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 HSPA9P38646 679 aaKnown RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 GRB10Q13322 594 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 PREPLQ4J6C6 727 aaPredicted RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 MYOCDQ8IZQ8 938 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 ANKS1AQ92625 1134 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 NSUN4Q96CB9 384 aaKnown RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 COL4A3BPQ9Y5P4 624 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 TDP2O95551 362 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 SLC18A3Q16572 532 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 UNC13DQ70J99 1090 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 DAAM2Q86T65 1068 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 SGSM3Q96HU1 749 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 FAM84BQ96KN1 310 aaPredicted RBP22■■□□□ 1.11
PPP1R3F-201ENST00000055335 MCM8Q9UJA3 840 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 PNMA2Q9UL42 364 aa22■■□□□ 1.11
PPP1R3F-201ENST00000055335 SSU72P8A0A1W2PR75 194 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 TRAPPC3O43617 180 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 LCA5LO95447 670 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 TNNI2P48788 182 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 SPTY2D1Q68D10 685 aaPredicted RBP21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 TBC1D1Q86TI0 1168 aaPredicted RBP21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 THOC1Q96FV9 657 aaKnown RBP21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 AK8Q96MA6 479 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 TRIM51Q9BSJ1 452 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 ISCUQ9H1K1 167 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 C6orf50Q9HD87 102 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 BLOC1S4Q9NUP1 217 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 SEC63Q9UGP8 760 aaKnown RBP21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 KRT18P05783 430 aaKnown RBP21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 CDC25CP30307 473 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 PEX26Q7Z412 305 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 FGFBP2Q9BYJ0 223 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 GLI3P10071 1580 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 ORC4O43929 436 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 FAM228AQ86W67 206 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 PLCB1Q9NQ66 1216 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 CEP72Q9P209 647 aa21.99■■□□□ 1.11
PPP1R3F-201ENST00000055335 EIF4E1BA6NMX2 242 aaKnown RBP21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 LRRC55Q6ZSA7 311 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 NOC2LQ9Y3T9 749 aaKnown RBP21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 NPHP3-ACAD11A0A0J9YXS1 232 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 NOL4O94818 638 aa21.98■■□□□ 1.11
PPP1R3F-201ENST00000055335 KIF4AO95239 1232 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms