RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 XIRP1Q702N8 1843 aaKnown RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 SLC37A4O43826 429 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 DNM2P50570 870 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 KIAA0753Q2KHM9 967 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 RMDN3Q96TC7 470 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 PDE11AQ9HCR9 933 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 A0A1W2PRG0 241 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 STXBP4Q6ZWJ1 553 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 SMAP1Q8IYB5 467 aaPredicted RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 PALM3A6NDB9 673 aaPredicted RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 EPB41P11171 864 aaKnown RBP13.28□□□□□ -0.28
CHPF2-201ENST00000035307 MCM3P25205 808 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 ADAM9Q13443 819 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 ASIC2Q16515 512 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 XKR9Q5GH70 373 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 STK36Q9NRP7 1315 aa13.28□□□□□ -0.28
CHPF2-201ENST00000035307 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.28
CHPF2-201ENST00000035307 P2RX5Q93086 422 aa13.27□□□□□ -0.28
CHPF2-201ENST00000035307 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.28
CHPF2-201ENST00000035307 RNF146Q9NTX7 359 aa13.27□□□□□ -0.28
CHPF2-201ENST00000035307 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 VAV2P52735 878 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 FAM102BQ5T8I3 360 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 ZNF658Q5TYW1 1059 aaPredicted RBP13.27□□□□□ -0.29
CHPF2-201ENST00000035307 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 TUBB4AP04350 444 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 EHHADHQ08426 723 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 TRIM14Q14142 442 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 Q3C1V9 767 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 GSPT2Q8IYD1 628 aaKnown RBP13.27□□□□□ -0.29
CHPF2-201ENST00000035307 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
CHPF2-201ENST00000035307 KRT5P13647 590 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 BIRC3Q13489 604 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 UBLCP1Q8WVY7 318 aaPredicted RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 PCIF1Q9H4Z3 704 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 HERC5Q9UII4 1024 aaKnown RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 CHP1Q99653 195 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 ENTPD3O75355 529 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 FTCDO95954 541 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 CTNNA2P26232 953 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 BAATQ14032 418 aaPredicted RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 SEPT7Q16181 437 aaKnown RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
CHPF2-201ENST00000035307 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.26□□□□□ -0.29
CHPF2-201ENST00000035307 LRRN2O75325 713 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 PRPF6O94906 941 aaKnown RBP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 TRAF1Q13077 416 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 PTPAQ15257 358 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 MFAP3LO75121 409 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 ITGB4P16144 1822 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 LMNB1P20700 586 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 NR2F2P24468 414 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 CAP2P40123 477 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 TGFB2P61812 414 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 CFAP58Q5T655 872 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 KCTD16Q68DU8 428 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 PAIP2Q9BPZ3 127 aaKnown RBP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 MLXIPQ9HAP2 919 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 ARMCX3Q9UH62 379 aaPredicted RBP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 MOCS3O95396 460 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 FXR1P51114 621 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 CCDC50Q8IVM0 306 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 PRPF38AQ8NAV1 312 aaKnown RBP13.25□□□□□ -0.29
CHPF2-201ENST00000035307 PPP1R13LQ8WUF5 828 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 NUP98P52948 1817 aa13.25□□□□□ -0.29
CHPF2-201ENST00000035307 TTC26A0AVF1 554 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 NFIBO00712 420 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 KCNK3O14649 394 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 PLCB3Q01970 1234 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 C2orf54Q08AI8 447 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 TICAM2Q86XR7 235 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
CHPF2-201ENST00000035307 TNFAIP3P21580 790 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 CNGA1P29973 690 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 EIF4A3P38919 411 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms