RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MAGEC2Q9UBF1 373 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PCDHA2Q9Y5H9 948 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■□□□□ 11.3
RTFDC1-201ENST00000023939 ZHX2Q9Y6X8 837 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 MYPNQ86TC9 1320 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 A0A1W2PQC6 194 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 LGALS16A8MUM7 142 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 EML1O00423 815 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 STX10O60499 249 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 EYA4O95677 639 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 ALAS1P13196 640 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 DSG3P32926 999 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 TRIM14Q14142 442 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 SH3D19Q5HYK7 790 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 FAM26FQ5R3K3 315 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 E4F1Q66K89 784 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 CCDC51Q96ER9 411 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 UIMC1Q96RL1 719 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 TAB2Q9NYJ8 693 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 AFG3L2Q9Y4W6 797 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 CTDP1Q9Y5B0 961 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 UBIAD1Q9Y5Z9 338 aa15.94■□□□□ 0.14
RTFDC1-201ENST00000023939 AKR1B15C9JRZ8 316 aaPredicted RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 CCP110O43303 1012 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 GAS7O60861 476 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 USP2O75604 605 aaPredicted RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 DDNO94850 711 aaPredicted RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 FGFR1OPO95684 399 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 ARSHQ5FYA8 562 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 MUM1L1Q5H9M0 696 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 NYAP1Q6ZVC0 841 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 CPXCR1Q8N123 301 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 ZNF507Q8TCN5 953 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 HPS3Q969F9 1004 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 ATG4CQ96DT6 458 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 SYT17Q9BSW7 474 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 RBBP6Q7Z6E9 1792 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 RLFQ13129 1914 aa15.93■□□□□ 0.14
RTFDC1-201ENST00000023939 KIF20AO95235 890 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 SSBP05455 408 aaKnown RBP eCLIP15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 ARP10275 920 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 ITGB5P18084 799 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 FECHP22830 423 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 COG2Q14746 738 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 EPHA7Q15375 998 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 XRRA1Q6P2D8 792 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 CATSPERGQ6ZRH7 1159 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 BAG1Q99933 345 aaPredicted RBP15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 ZNF577Q9BSK1 485 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 VPS16Q9H269 839 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
RTFDC1-201ENST00000023939 IPO5O00410 1097 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 SLITRK3O94933 977 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 DNM2P50570 870 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 HMGCS2P54868 508 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 PSMC6P62333 389 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 UBXN2AP68543 259 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 MAP3K9P80192 1104 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 GIT2Q14161 759 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TKFCQ3LXA3 575 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 ZCWPW2Q504Y3 356 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 CNGA4Q8IV77 575 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 MB21D1Q8N884 522 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TEKT3Q9BXF9 490 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 NAA15Q9BXJ9 866 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 JADE2Q9NQC1 790 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TMOD4Q9NZQ9 345 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 PAPPA2Q9BXP8 1791 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 USP27XA6NNY8 438 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 KIF2AO00139 706 aaPredicted RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 MFAP3LO75121 409 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TUBB4AP04350 444 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 RPS6P62753 249 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 RBL2Q08999 1139 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 CNOT6LQ96LI5 555 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TSG101Q99816 390 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 TUBGCP2Q9BSJ2 902 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 SNCAIPQ9Y6H5 919 aa15.91■□□□□ 0.14
RTFDC1-201ENST00000023939 GYPCP04921 128 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 TPM2P07951 284 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 TPM1P09493 284 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 ADKP55263 362 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 UBXN1Q04323 297 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 PABPC4Q13310 644 aaKnown RBP eCLIP15.9■□□□□ 0.143e-10■■■■□ 25.4
RTFDC1-201ENST00000023939 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 IL31RAQ8NI17 732 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms