RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 IydQ9DCX8 285 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Bub1bQ9Z1S0 1052 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Eif4g1Q6NZJ6 1600 aaKnown RBP9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Sash1P59808 1230 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Taf1bP97358 586 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Hipk4Q3V016 616 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Bfsp2Q6NVD9 416 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Sestd1Q80UK0 696 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Slc4a7Q8BTY2 1034 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Afap1l1Q8BZI0 768 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Bst2Q8R2Q8 172 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Chchd6Q91VN4 273 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Atp5dQ9D3D9 168 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Tfcp2Q9ERA0 502 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Pola1P33609 1465 aa9.78□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Trim12cD3Z3L3 497 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Erp29P57759 262 aaKnown RBP9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Ankrd27Q3UMR0 1048 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Sult1d1Q3UZZ6 295 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Rundc3bQ6PDC0 408 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Armcx6Q8K3A6 301 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Gins4Q99LZ3 223 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Tuba8Q9JJZ2 449 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Plod1Q9R0E2 728 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Atp7aQ64430 1491 aa9.77□□□□□ -0.84
Ptpre-204ENSMUST00000209979 Cyb5rlB1AS42 316 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Pdcd2P46718 343 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Mark3Q03141 753 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Wdr70Q3TWF6 657 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 TwistnbQ78WZ7 330 aaKnown RBP9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 AdalQ80SY6 360 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Catsper3Q80W99 395 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Ephb1Q8CBF3 984 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Arl8aQ8VEH3 186 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Hdac11Q91WA3 347 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Grtp1Q9D3N8 359 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Edc4Q3UJB9 1406 aaKnown RBP9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Naip7Q9JIB3 1402 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Naip6Q9JIB6 1403 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Astn2Q80Z10 1352 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Ttc17E9PVB5 1198 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Mfsd4b4J3QNS5 503 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Sult6b1P0CC03 303 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Il7P10168 154 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Cdh2P15116 906 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Thumpd3P97770 505 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Inf2Q0GNC1 1273 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Q3KNL4 93 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Olfml3Q8BK62 406 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Thoc1Q8R3N6 657 aaKnown RBP9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 FtcdQ91XD4 541 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Nip7Q9CXK8 180 aaKnown RBP9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Timm50Q9D880 353 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 GsdmeQ9Z2D3 512 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Wdr62Q3U3T8 1523 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Gm29133A0A1B0GT72 266 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Krt78E9Q0F0 1068 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Mup5P11591 180 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Kiaa1468Q148V7 1216 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Stxbp3Q60770 592 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Ankrd45Q810N6 248 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Clic4Q9QYB1 253 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Krt27Q9Z320 448 aa9.77□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Akap17bA2A3V1 959 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Csn1s1P19228 313 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 PorP37040 678 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Sycp3P70281 254 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Hnrnph2P70333 449 aaKnown RBP9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 ArsiQ32KI9 573 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Ifit1Q64282 463 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Naif1Q6PFD7 327 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 C2cd5Q7TPS5 1016 aaKnown RBP9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Trim31Q8R0K2 507 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 St5Q924W7 1134 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 PdhbQ9D051 359 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Zranb2Q9R020 330 aaKnown RBP9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Mapkbp1Q6NS57 1503 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Fam81bA0A140LI28 432 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 TriqkB2B9E1 86 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 1700024B05RikE9Q6D7 167 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Sstr3P30935 428 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 GartQ64737 1010 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Rad17Q6NXW6 688 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Tmprss15P97435 1069 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Cab39Q06138 341 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Chn2Q80XD1 332 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Tmem87aQ8BXN9 555 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Dhx58Q99J87 678 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Gmeb1Q9JL60 562 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Dnajb7Q9QYI8 312 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Sema3fO88632 785 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 CiitaP79621 1155 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Serpina1cQ00896 412 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Serpina1dQ00897 413 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 TfrcQ62351 763 aaKnown RBP9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Dhx38Q80X98 1228 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Q80Y73 168 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Tspan9Q8BJU2 239 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Prpf18Q8BM39 342 aa9.76□□□□□ -0.85
Ptpre-204ENSMUST00000209979 Pwp2Q8BU03 919 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms