RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Tlk2O55047 718 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Schip1P0DPB4 484 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hipk4Q3V016 616 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Znf148Q61624 794 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Itih2Q61703 946 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 FsbpQ8BKE5 299 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Plekho1Q9JIY0 408 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 NbnQ9R207 751 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Col1a2Q01149 1372 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Il27raO70394 623 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Mx1P09922 631 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Akr1b7P21300 316 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Aqp8P56404 261 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 GuloP58710 440 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Gas8Q60779 478 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hif1aQ61221 836 aaKnown RBP12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 NelfbQ8C4Y3 580 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Lin7aQ8JZS0 233 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Zbed3Q9D0L1 228 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ccdc103Q9D9P2 237 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Tcof1O08784 1320 aaKnown RBP12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Fam167bP17257 162 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Cops2P61202 443 aaKnown RBP12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 SlmapQ3URD3 845 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Clic6Q8BHB9 596 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Clic5Q8BXK9 251 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ptcd1Q8C2E4 695 aaKnown RBP12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Ints9Q8K114 658 aaKnown RBP12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Pgm1Q9D0F9 562 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Mfap3lQ9D3X9 409 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Hdac6Q9Z2V5 1149 aa12.96□□□□□ -0.33
Bdnf-205ENSMUST00000111045 Dip2aQ8BWT5 1523 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Grin2dQ03391 1323 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Kif23E9Q5G3 953 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Rab17P35292 214 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Iqsec3Q3TES0 1195 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ccdc85aQ5SP85 500 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ccdc92bQ5SUE3 299 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Nab2Q61127 525 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Cnksr2Q80YA9 1032 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Prpf6Q91YR7 941 aaKnown RBP12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ttc5Q99LG4 440 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Naa16Q9DBB4 864 aa12.96□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Mybpc1D3YU50 1127 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm340F6RGI3 1242 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm28047Q3US59 414 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 CcnjlQ5SRT8 387 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ezh2Q61188 746 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Fastkd1Q6DI86 829 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Pabpc4Q6PHQ9 660 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Smndc1Q8BGT7 238 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 ArpinQ9D0A3 226 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Mei1Q9D4I2 1268 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ifrd2Q9D8U0 441 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Myo3bQ1EG27 1305 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Zfp839E9PUU5 921 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Rag1P15919 1040 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gsta4P24472 222 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 SsbP32067 415 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Jdp2P97875 163 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Patl1Q3TC46 770 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 E330034G19RikQ3UWX6 351 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Pacsin1Q61644 441 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm21985Q6P6P5 1106 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Cep85Q8BMK0 761 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Rccd1Q8BTU7 377 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 PudpQ9D5U5 234 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Eif4enif1Q9EST3 983 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Rnf4Q9QZS2 194 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Plod1Q9R0E2 728 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm10354K7N6A0 256 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Sept2P42208 361 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Nat2P50295 290 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Kpnb1P70168 876 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Trim43cP86449 446 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ddb1Q3U1J4 1140 aaKnown RBP12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Exoc3Q6KAR6 755 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Nup58Q8R332 587 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Taf5lQ91WQ5 589 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Capn9Q9D805 690 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Krt27Q9Z320 448 aa12.95□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Trpm1Q2TV84 1622 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm43638A0A0J9YU36 694 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm1993A6X8I0 212 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 SlxD3Z347 212 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Lrrc4bP0C192 709 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Armc2Q3URY6 854 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Gm5168Q4KL04 211 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Syce2Q505B8 171 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 AarsQ8BGQ7 968 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ppp1r37Q8BKR5 712 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Dclk3Q8BWQ5 790 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Tgif2lx2Q8K5B9 231 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Dctn2Q99KJ8 402 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Med21Q9CQ39 144 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Nip7Q9CXK8 180 aaKnown RBP12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Pgm3Q9CYR6 542 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Cib4Q9D9N5 185 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 CtcflA2APF3 636 aa12.94□□□□□ -0.34
Bdnf-205ENSMUST00000111045 Ampd3O08739 766 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms