RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 HyiQ8R1F5 277 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 PpanQ91YU8 470 aaKnown RBP20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Srgap2Q91Z67 1071 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Tor1aip1Q921T2 595 aaKnown RBP20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 SyncQ9EPM5 470 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Tacc2Q9JJG0 1149 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 1700017N19RikA0A087WPJ1 469 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Gna11P21278 359 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Slc12a2P55012 1205 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Meis3P97368 378 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Gcnt1Q09324 428 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Lrrc55Q3UY51 311 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Rhpn1Q61085 643 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Scfd1Q8BRF7 639 aaKnown RBP20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Bpifb6Q8BU51 449 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Adcy3Q8VHH7 1145 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 CsadQ9DBE0 493 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Eid1Q9DCR4 169 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Prl2c5Q9JLV9 222 aa20.21■□□□□ 0.83
Trim47-202ENSMUST00000106441 Myh8P13542 1937 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Tmem132bF7BAB2 1078 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Chrna9G3X8Z7 479 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Enc1O35709 589 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Rnf40Q3U319 1001 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Nsrp1Q5NCR9 542 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ccdc172Q810N9 267 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Epha10Q8BYG9 1007 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Leng8Q8CBY3 785 aaKnown RBP20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Calhm4Q8CE93 315 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Tldc1Q8K0P3 455 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Spats2Q8K1N4 545 aaKnown RBP20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Erlin1Q91X78 346 aa20.2■□□□□ 0.82
Trim47-202ENSMUST00000106441 Drd5Q8BLD9 478 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Prpf6Q91YR7 941 aaKnown RBP20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Serpinb12Q9D7P9 423 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Il21rQ9JHX3 529 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Git2Q9JLQ2 708 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Sel1lQ9Z2G6 790 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Dnai2A2AC93 623 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Trim55G3X8Y1 545 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ccdc157Q5SPX1 718 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Kif2bQ8C0N1 668 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Plagl2Q925T4 496 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Smtnl1Q99LM3 459 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Calr3Q9D9Q6 380 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 MycbpQ9EQS3 103 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 SynrgQ5SV85 1306 aa20.19■□□□□ 0.82
Trim47-202ENSMUST00000106441 Folh1O35409 752 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Mdh1bQ5F204 500 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Mettl25Q6NXH8 597 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Senp5Q6NXL6 749 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Def6Q8C2K1 630 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Mmgt1Q8K273 131 aaKnown RBP20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ifih1Q8R5F7 1025 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Klra17Q9JMA4 273 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ercc4Q9QZD4 917 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Igf2rQ07113 2483 aaKnown RBP20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Usp31E9Q6Y8 1344 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Magea10A2AMW4 325 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ppp1r1bQ60829 194 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ddx55Q6ZPL9 600 aaKnown RBP20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Jade2Q6ZQF7 829 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Galnt17Q7TT15 598 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Prl7b1Q8CGZ9 251 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 GlyctkQ8QZY2 523 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 EhhadhQ9DBM2 718 aa20.18■□□□□ 0.82
Trim47-202ENSMUST00000106441 Kcna1P16388 495 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ireb2Q811J3 963 aaKnown RBP20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Zkscan3Q91VW9 553 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 TbcbQ9D1E6 244 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 ThegQ9JMB1 375 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Prkab1Q9R078 270 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Pabpc1lA2A5N3 607 aaKnown RBP20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Gm1758F6VZZ1 202 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 PgfP49764 158 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Zmym1Q3TJB1 983 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Tax1bp1Q3UKC1 814 aaKnown RBP20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Cd37Q61470 281 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ces3aQ63880 571 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Trim6Q8BGE7 488 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Znf771Q8BJ90 317 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Usp15Q8R5H1 981 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ces3bQ8VCU1 571 aa20.17■□□□□ 0.82
Trim47-202ENSMUST00000106441 Lrrc6O88978 473 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 LdhaP06151 332 aaKnown RBP20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Gprin1Q3UNH4 932 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Prr7Q3V0I2 269 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Asic3Q6X1Y6 530 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Sulf1Q8K007 870 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Cgref1Q8R1U2 281 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Atp1a1Q8VDN2 1023 aaKnown RBP20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Krt79Q8VED5 531 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Trap1Q9CQN1 706 aaKnown RBP20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Arpp21Q9DCB4 807 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Tfap4Q9JIZ5 338 aa20.16■□□□□ 0.82
Trim47-202ENSMUST00000106441 Akr1c19G3X9Y6 323 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Mmp10O55123 476 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Prl2c3P04768 224 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Cxcl9P18340 126 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Mcm7Q61881 719 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms