RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Gm7995L7N2E4 160 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Nub1P54729 614 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Snrnp35Q9D384 244 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tecpr2Q3UH45 1423 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Vmn2r78K7N6U5 853 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Orc4O88708 433 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Samhd1Q60710 627 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Mms19Q9D071 1031 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Arl6ip4Q9JM93 229 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Myo5cE9Q1F5 1742 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Kif23E9Q5G3 953 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cyp3a25O09158 503 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Casp14O89094 257 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 NsfP46460 744 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 ClgnP52194 611 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Actn4P57780 912 aaKnown RBP17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Mroh1E0CZ22 1640 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Atp11aP98197 1187 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cep70Q6IQY5 616 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 C8aQ8K182 587 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Apopt1Q9CQW7 192 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Spc24Q9D083 201 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Rwdd2aQ9D9S3 292 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Nfe2l3Q9WTM4 660 aa17.07■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Hoxd10P28359 340 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Nt5c2Q3V1L4 560 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Pnma5Q5DTT8 618 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Itgb1bp2Q9R000 350 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cul1Q9WTX6 776 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Prex1Q69ZK0 1650 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cep57Q8CEE0 500 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Utp11Q9CZJ1 253 aaKnown RBP17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Sf3a3Q9D554 501 aaKnown RBP17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Klc4Q9DBS5 619 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Ess2O70279 479 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Irx1P81068 480 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Dync1li2Q6PDL0 492 aaKnown RBP17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Dnajc17Q91WT4 303 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tom1l1Q923U0 474 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Ctnnd1P30999 938 aaKnown RBP17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Kif5aP33175 1027 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Rnf207Q3V3A7 635 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Pdlim2Q8R1G6 349 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Ophn1Q99J31 802 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Rbp7Q9EPC5 134 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Pidd1Q9ERV7 915 aa17.06■□□□□ 0.32
Clcn3-203ENSMUST00000093490 StamP70297 548 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Gm2163Q6PCY5 473 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Trim7Q923T7 510 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tmod3Q9JHJ0 352 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 IdeQ9JHR7 1019 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Exoc4O35382 975 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Zc3h18Q0P678 948 aaKnown RBP17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Srrm1Q52KI8 946 aaKnown RBP17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tcp11Q01755 566 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Psd3Q2PFD7 1037 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Gm4981Q3ULJ8 291 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Krt74Q6IFZ9 495 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Med7Q9CZB6 233 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Mfap3lQ9D3X9 409 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Setbp1Q9Z180 1582 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Ephb4P54761 987 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tbc1d22bQ80VE5 505 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 LRWD1Q8BUI3 648 aaKnown RBP17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Fndc3aQ8BX90 1198 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Sept11Q8C1B7 431 aaKnown RBP17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Parp10Q8CIE4 960 aa17.05■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cul4bA2A432 970 aaKnown RBP17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Grem2O88273 168 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Nr2f2P43135 414 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 S100a5P63084 93 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Micall2Q3TN34 1009 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Fam228bQ497Q6 232 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Nab2Q61127 525 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 ShprhQ7TPQ3 1674 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Stx2Q00262 289 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Pabpc4Q6PHQ9 660 aaKnown RBP17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 CacybpQ9CXW3 229 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Stat2Q9WVL2 923 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Krt78E9Q0F0 1068 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Atp6v0d2Q80SY3 350 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Cog5Q8C0L8 829 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Fermt3Q8K1B8 665 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Mphosph6Q9D1Q1 161 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Grtp1Q9D3N8 359 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Foxo4Q9WVH3 505 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Sox5P35710 763 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 C87499Q3UX49 493 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Gdap1l1Q8VE33 370 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Pcdhb15Q91Y04 786 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Gm13023A2A8N2 498 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Haus4Q8BFT2 363 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Sf3b3Q921M3 1217 aaKnown RBP17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 PalmdQ9JHU2 551 aa17.04■□□□□ 0.32
Clcn3-203ENSMUST00000093490 PtprmP28828 1452 aa17.03■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Tmed1Q3V009 227 aa17.03■□□□□ 0.32
Clcn3-203ENSMUST00000093490 UrgcpQ5NCI0 926 aa17.03■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Git1Q68FF6 770 aa17.03■□□□□ 0.32
Clcn3-203ENSMUST00000093490 RimklbQ80WS1 387 aa17.03■□□□□ 0.32
Clcn3-203ENSMUST00000093490 Acad11Q80XL6 779 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms