RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ppp1r3gQ9CW07 347 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Map7d1A2AJI0 846 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Bpifb4A2BGH0 617 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 EmbP21995 330 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Stat3P42227 770 aaKnown RBP12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Nlrp2Q4PLS0 1046 aaKnown RBP12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Zscan26Q5RJ54 466 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ezh2Q61188 746 aaKnown RBP12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Mcm7Q61881 719 aaKnown RBP12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Micall1Q8BGT6 870 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Igdcc3Q8BQC3 813 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Spice1Q8C804 860 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lrrc41Q8K1C9 807 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Cacnb1Q8R3Z5 597 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Bhmt2Q91WS4 363 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 4933428M09RikQ9D3X3 192 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 2310002L09RikQ9D7L5 217 aa12.5□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gm7168A0AUV4 508 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Eddm13E9Q7F5 164 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 AoahO35298 574 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Myl1P05977 188 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Setd4P58467 439 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lrrc36Q3V0M2 755 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Igf2bp2Q5SF07 592 aaKnown RBP12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lrrcc1Q69ZB0 1026 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Camsap3Q80VC9 1252 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Cep95Q8BVV7 827 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ptrh1Q8BW00 204 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 MslnlQ8C160 685 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Q8C4P0 716 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Cd209bQ8CJ91 325 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc14Q8K2J4 934 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tor1aip1Q921T2 595 aaKnown RBP12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc105Q9D4K7 499 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Klhl40Q9D783 621 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Fip1l1Q9D824 581 aaKnown RBP12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 SrcapA0A087WQ44 3271 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Il13ra2O88786 383 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Krt18P05784 423 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 EporP14753 507 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Npr3P70180 536 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Meis2P97367 477 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Wdr70Q3TWF6 657 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 StimateQ3UF25 288 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc84Q4VA36 332 aaKnown RBP12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Dcdc2Q5DU00 475 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Prpf40bQ80W14 870 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Depdc1aQ8CIG0 804 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Znf445Q8R2V3 986 aa12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 SmapQ9R0P4 181 aaKnown RBP12.49□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Acot10Q32MW3 439 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Cyp2c67Q569X9 491 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Pnma5Q5DTT8 618 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lsm14aQ8K2F8 462 aaKnown RBP12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 AacsQ9D2R0 672 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Efhd1Q9D4J1 240 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Egfl6Q9JJZ5 550 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Klrk1O54709 232 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tpp1O89023 562 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Chp1P61022 195 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gigyf2Q6Y7W8 1291 aaKnown RBP12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Fbxo11Q7TPD1 930 aaKnown RBP12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tmem39bQ810L4 492 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Thap3Q8BJ25 218 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Rgs3Q9DC04 966 aa12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Uso1Q9Z1Z0 959 aaKnown RBP12.48□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gm45208A0A140LJ36 292 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Heatr4E9Q357 955 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Msh3P13705 1091 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 N6amt1Q6SKR2 214 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 LnpkQ7TQ95 425 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ddx19bQ8BZY3 494 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Dennd2aQ8C4S8 1000 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Znf131Q8K3J5 619 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ifih1Q8R5F7 1025 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tacc2Q9JJG0 1149 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Akap8lQ9R0L7 642 aaKnown RBP12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Dnajb6O54946 365 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 IkbkbO88351 757 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 D1Pas1P16381 660 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Abcb4P21440 1276 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc102aQ3TMW1 549 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Klrg2Q3UM83 387 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Lrrc55Q3UY51 311 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Slc9a2Q3ZAS0 814 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Sdccag8Q80UF4 717 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 HyiQ8R1F5 277 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Grin3bQ91ZU9 1003 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 ClppO88696 272 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Kcna2P63141 499 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Gxylt1Q3UHH8 404 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Trpc6Q61143 930 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 CbarpQ66L44 698 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Znf280dQ68FE8 974 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Swap70Q6A028 585 aaKnown RBP12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Drc7Q6V3W6 876 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ccdc12Q8R344 166 aaKnown RBP12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Rhobtb3Q9CTN4 611 aa12.47□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Mical3Q8CJ19 1993 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Dnajc21E9Q8D0 531 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms