RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 KhsrpQ3U0V1 748 aaKnown RBP27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Cpa2Q504N0 417 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Kcnj11Q61743 390 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Vps53Q8CCB4 832 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Scnn1bQ9WU38 638 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Trmt13Q8BYH3 481 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Tas1r1Q99PG6 842 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Dph6Q9CQ28 267 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 NenfQ9CQ45 171 aa27.74■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 HttP42859 3119 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Gm43738A0A0G2JEA5 862 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Gm11549A0A286YD83 63 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Slc39a2G3X943 309 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Psg29Q3URN6 468 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Ttc7aQ8BGB2 858 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Defb19Q8K3I8 83 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Smco2Q9DA21 347 aa27.73■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Lmntd2Q0VET5 664 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Palb2Q3U0P1 1104 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Krt9Q6RHW0 743 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Bbs9Q811G0 885 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 MafaQ8CF90 359 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Tas1r3Q925D8 858 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Med24Q99K74 987 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 NapaQ9DB05 295 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Nlrc5C3VPR6 1915 aa27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Wdr33Q8K4P0 1330 aaKnown RBP27.72■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Barx2O08686 283 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Glud1P26443 558 aaKnown RBP27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Ccdc66Q6NS45 935 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Prr11Q8BHE0 368 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Azin2Q8BVM4 459 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Aldh5a1Q8BWF0 523 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 IydQ9DCX8 285 aa27.71■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Arhgef10lA2AWP8 1280 aa27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Gm3414Q3TNU4 584 aa27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Avpr1aQ62463 423 aa27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Cwf19l2Q8BG79 887 aaKnown RBP27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Srek1Q8BZX4 494 aaKnown RBP27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Wdr64Q9D565 1086 aa27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Mrvi1Q9WUX5 899 aaKnown RBP27.7■■■□□ 2.03
Cpsf4-201ENSMUST00000070487 Gm3095E9Q058 166 aa27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ppp2r5cQ60996 524 aa27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Smc2Q8CG48 1191 aaKnown RBP27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Slc25a38Q91XD8 326 aa27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cntn6Q9JMB8 1028 aa27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Eif2ak1Q9Z2R9 619 aa27.7■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Gm45015A0A140LII9 184 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Gm18336A0A140LIU8 765 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Lta4hP24527 611 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Col19a1Q0VF58 1136 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Eif3j1Q3UGC7 261 aaKnown RBP27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ccdc33Q3ULW6 985 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Nol12Q8BG17 217 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Champ1Q8K327 802 aaKnown RBP27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 BcamQ9R069 622 aa27.69■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Psmc6P62334 389 aa27.68■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Gm28047Q3US59 414 aa27.68■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ubash3aQ3V3E1 624 aa27.68■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ahcyl2Q68FL4 613 aaKnown RBP27.68■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Sun2Q8BJS4 731 aa27.68■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cdh15P33146 784 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Plekha7Q3UIL6 1118 aaKnown RBP27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Tas2r124Q7M718 309 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Trim47Q8C0E3 641 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Galk1Q9R0N0 392 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Mad1l1Q9WTX8 717 aaKnown RBP27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Trip11E9Q512 1976 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Trim12cD3Z3L3 497 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Gtf2f1Q3THK3 508 aaKnown RBP27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Dph1Q5NCQ5 438 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cyp7b1Q60991 507 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 R3hcc1Q8BSI6 488 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Nrbp2Q91V36 499 aa27.67■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Pramef17A2ASJ1 475 aa27.66■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cnnm4Q69ZF7 771 aa27.66■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Arrdc3Q7TPQ9 414 aa27.66■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ces4aQ8R0W5 563 aa27.66■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Arid3bQ9Z1N7 568 aa27.66■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cyp27b1O35084 507 aa27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 PparaP23204 468 aa27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Zbed4Q80WQ9 1168 aa27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Slc17a8Q8BFU8 601 aa27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Nemp2Q8CB65 421 aa27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Hexim1Q8R409 356 aaKnown RBP27.65■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ptpn11P35235 597 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 MafbP54841 323 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Trak2Q6P9N8 913 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 PogkQ80TC5 607 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 LppQ8BFW7 613 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Cnksr3Q8BMA3 555 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Adnp2Q8CHC8 1165 aaKnown RBP27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ifih1Q8R5F7 1025 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Olfr1494Q8VGP8 315 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Ranbp17Q99NF8 1088 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Calml3Q9D6P8 149 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Stxbp4Q9WV89 557 aa27.64■■■□□ 2.02
Cpsf4-201ENSMUST00000070487 Smim10l2aA0A0B4J1F8 78 aa27.63■■■□□ 2.01
Cpsf4-201ENSMUST00000070487 Sptlc1O35704 473 aa27.63■■■□□ 2.01
Cpsf4-201ENSMUST00000070487 Mgat3Q10470 538 aa27.63■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms