RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Slc9a1Q61165 820 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Retreg2Q6NS82 541 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ccdc57Q6PHN1 1016 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 HhatQ8BMT9 499 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Stxbp5Q8K400 1152 aaKnown RBP8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cacnb1Q8R3Z5 597 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ttc8Q8VD72 515 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Setd3Q91WC0 594 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Dph5Q9CWQ0 281 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Drc3Q9D5E4 523 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Arl6ip4Q9JM93 229 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ddx23D3Z0M9 819 aaKnown RBP8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Adam7O35227 789 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ess2O70279 479 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 GfapP03995 430 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Becn2P0DM65 447 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Zscan2Q07230 614 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Trim37Q6PCX9 961 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Phf20Q8BLG0 1010 aaKnown RBP8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 HlfQ8BW74 295 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fam160b1Q8CDM8 764 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Mrpl50Q8VDT9 159 aaKnown RBP8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Trim60Q8VI40 466 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 IydQ9DCX8 285 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Krt24A1L317 512 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nmt2O70311 529 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 H2afzP0C0S6 128 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 H2afvQ3THW5 128 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm4981Q3ULJ8 291 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ccdc160Q3UYG1 323 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ccdc185Q3V118 621 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Taok1Q5F2E8 1001 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cdc37Q61081 379 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rpf1Q7TND5 349 aaKnown RBP8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Slc20a2Q80UP8 656 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ndufab1Q9CR21 156 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nsmce1Q9D720 266 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Kidins220E9Q9B7 1793 aa8.13□□□□□ -1.11
Usp40-201ENSMUST00000040783 Pabpc1lA2A5N3 607 aaKnown RBP8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Exoc4O35382 975 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Pgrmc1O55022 195 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fgl2P12804 432 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Chrna5Q2MKA5 467 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nop9Q8BMC4 636 aaKnown RBP8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ptrh1Q8BW00 204 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Lrrc41Q8K1C9 807 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rassf9Q8K342 435 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Tspyl4Q8VD63 406 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Spdl1Q923A2 608 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cmtm5Q9D6G9 156 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Atp1a4Q9WV27 1032 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fam81bA0A140LI28 432 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fam43bA2AM80 330 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Iqca1lA6H690 825 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Tmem165P52875 323 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cyp2e1Q05421 493 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nhej1Q3KNJ2 295 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm136Q3V037 328 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Tpp2Q64514 1262 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Krt77Q6IFZ6 572 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Micall1Q8BGT6 870 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Usp44Q8C2S0 711 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Alx1Q8C8B0 326 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Tbx22Q8K402 517 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gga1Q8R0H9 635 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 4931423N10RikQ9D4J9 382 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Copb1Q9JIF7 953 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Psmd14O35593 310 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Tlr8P58682 1032 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Lins1Q3U1D0 764 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Trmt10cQ3UFY8 414 aaKnown RBP8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ccdc110Q3V125 848 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Mybpc2Q5XKE0 1136 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Mysm1Q69Z66 819 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Armcx2Q6A058 784 aaKnown RBP8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Oxsr1Q6P9R2 527 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rcor2Q8C796 523 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Lonp1Q8CGK3 949 aaKnown RBP8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nek9Q8K1R7 984 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gipc1Q9Z0G0 333 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Krt28A6BLY7 462 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Krt90E9Q1Z0 538 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm6121L7MUF1 212 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Zfpm1O35615 995 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 MybP06876 636 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cst8P32766 142 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Snai1Q02085 264 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rtel1Q0VGM9 1203 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Edem3Q2HXL6 931 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 GmpsQ3THK7 693 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 BC048507Q80ZS7 89 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Znf365Q8BG89 408 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 FtoQ8BGW1 502 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 N4bp3Q8C7U1 537 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ppp1r16bQ8VHQ3 568 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Paip2bQ91W45 136 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Med15Q924H2 789 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ribc1Q9D0B8 379 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Mettl7bQ9DD20 244 aa8.12□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cdc42bpbQ7TT50 1713 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms