RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Rabgef1Q9JM13 491 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Cpsf3Q9QXK7 684 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Tac1P41539 130 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Inpp1P49442 396 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ripor2Q80U16 1078 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Syde2E9PUP1 1314 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Miga1Q4QQM5 600 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 CnstQ8CBC4 711 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 RpsaP14206 295 aaKnown RBP17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Snx2Q9CWK8 519 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Bnip3lQ9Z2F7 218 aa17.83■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Adgrl3Q80TS3 1537 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Sema3fO88632 785 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Zcchc18Q8VD24 393 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gm21962L7N280 338 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pde6aP27664 859 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gad1P48318 593 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Sesn2P58043 480 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Adora1Q60612 326 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 NemfQ8CCP0 1064 aaKnown RBP17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Veph1A1A535 833 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ets1P27577 440 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ggps1Q9WTN0 300 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Zscan12Q9Z1D7 501 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Krt27Q9Z320 448 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rsad1Q5SUV1 442 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Zfp449Q8CB76 518 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 FscbA1EGX6 1074 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Glt1d1A4FUP9 346 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Il2P04351 169 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Stat4P42228 749 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Trim35Q8C006 501 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Large2Q5XPT3 690 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Kiaa1841Q68FF0 718 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 PlvapQ91VC4 438 aa17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Usp54Q8BL06 1588 aaKnown RBP17.82■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 4932429P05RikA2ADI4 785 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Stox1B2RQL2 990 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Hps6Q8BLY7 805 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rbm31yQ9D3U4 565 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 YwhahP68510 246 aaKnown RBP17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pak4Q8BTW9 593 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ero1aQ8R180 464 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Satb2Q8VI24 733 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 RpainQ9CWY9 219 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 4921524L21RikQ9D5T2 438 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Krt24A1L317 512 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Kiaa1468Q148V7 1216 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Prpf38aQ4FK66 312 aaKnown RBP17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ap1s3Q7TN05 154 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 ScgnQ91WD9 276 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ifi35Q9D8C4 286 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Arl4cP61208 192 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Tcp11Q01755 566 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Trim43aQ3TL54 445 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Lca5Q80ST9 704 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gpcpd1Q8C0L9 675 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Hps4Q99KG7 671 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Serpinb3aG3X9V8 387 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pja1O55176 578 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gtpbp6Q3U6U5 514 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Nudcd3Q8R1N4 363 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Syf2Q9D198 242 aaKnown RBP17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Trim72Q1XH17 477 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Stambpl1Q76N33 436 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Letm2Q7TNU7 480 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Crlf3Q9Z2L7 442 aa17.81■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Scaf11E9PZM7 1456 aaKnown RBP17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Thumpd3P97770 505 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 CoilQ5SU73 570 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Syt2P46097 422 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Arhgef9Q3UTH8 516 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Krt39Q6IFX4 482 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Mei4Q8BRM6 389 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pspc1Q8R326 523 aaKnown RBP17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 HibadhQ99L13 335 aaKnown RBP17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Shcbp1Q9Z179 668 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Flot2Q60634 428 aaKnown RBP17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Zbtb40Q6PCS8 1258 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 AsphQ8BSY0 741 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 TbcbQ9D1E6 244 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Cmtm5Q9D6G9 156 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 A0A286YCQ6 122 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Myo1eE9Q634 1107 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 GmipQ6PGG2 971 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ppp2r5dQ91V89 594 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rnf17Q99MV7 1640 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 CenpkQ9ESN5 271 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 FliiQ9JJ28 1271 aa17.8■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Bbs9Q811G0 885 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Stn1Q8K2X3 378 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 CpvlQ9D3S9 478 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Usp42B2RQC2 1324 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gm45194A0A140LJG2 572 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Otub1Q7TQI3 271 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Washc5Q8C2E7 1159 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Sf3a3Q9D554 501 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 DohhA0A1Y7VJ29 135 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 DgkkE9Q7N4 1118 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Trim38Q5SZ99 471 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms