RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Pdzd8B9EJ80 1147 aa24.94■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Fam178bQ24JP3 464 aa24.94■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Dpp8Q80YA7 892 aa24.94■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 GlyctkQ8QZY2 523 aa24.94■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Rhobtb1Q9DAK3 695 aa24.94■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 TfrcQ62351 763 aaKnown RBP24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Tut1Q8R3F9 869 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Kmt5aQ2YDW7 349 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Dennd2cQ6P9P8 914 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Cacna2d1O08532 1103 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Art2bO35975 289 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Per2O54943 1257 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Fdx1P46656 188 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Mettl24Q8CCB5 363 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Aldh18a1Q9Z110 795 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Wars2Q9CYK1 360 aa24.93■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Cul4bA2A432 970 aaKnown RBP24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Tmem132dQ76HP3 1097 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Setd6Q9CWY3 473 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 A0A1Y7VML8 143 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Krt1P04104 637 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Nek1P51954 1203 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Usp44Q8C2S0 711 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gm45194A0A140LJG2 572 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Cyp3a57D3YYZ0 503 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 C2cd5Q7TPS5 1016 aaKnown RBP24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Miga2Q8BK03 593 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Pak4Q8BTW9 593 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Krt27Q9Z320 448 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Plch2A2AP18 1501 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Fyb2A2A995 729 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Nr1i3O35627 358 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Tac1P41539 130 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 CpQ61147 1061 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Prr18Q6PAN7 307 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Adrm1Q9JKV1 407 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gbp4A4UUI3 631 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Krt32Q62168 407 aa24.92■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gm6657A0A1B0GRJ3 277 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Zfp956Q3UZY6 572 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Miga1Q4QQM5 600 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Q922C1 641 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ccdc97Q9DBT3 340 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Cyp3a25O09158 503 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 MagohP61327 146 aaKnown RBP24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Mapk6Q61532 720 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 MagohbQ9CQL1 146 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Serpina9Q9D7D2 418 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 GnptabQ69ZN6 1235 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Fsd1lQ8BYN5 507 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Lrrc41Q8K1C9 807 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Nr2e3Q9QXZ7 395 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Suclg2Q9Z2I8 433 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Mylk3Q3UIZ8 795 aa24.91■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gm3415J3QMS8 315 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Fnbp1Q80TY0 616 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gm3404Q9D506 307 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Cnpy3Q9DAU1 276 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ccdc154Q6RUT8 657 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 LtkP08923 888 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Tfdp1Q08639 410 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Krt80Q0VBK2 452 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 C87499Q3UX49 493 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 AsphQ8BSY0 741 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Mms19Q9D071 1031 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Dusp10Q9ESS0 483 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 VdrP48281 422 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Dhx40Q6PE54 779 aaKnown RBP24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ttc1Q91Z38 292 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Tex21Q9R0U9 575 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Eif2ak1Q9Z2R9 619 aa24.9■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ube4aE9Q735 1028 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Serpinb8O08800 374 aaKnown RBP24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Arl4cP61208 192 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Smg5Q6ZPY2 1017 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 GancQ8BVW0 898 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Usp33Q8R5K2 909 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Mrps9Q9D7N3 390 aaKnown RBP24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Rtn3Q9ES97 964 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Myo1eE9Q634 1107 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ice2Q3UZ18 988 aaKnown RBP24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 GmipQ6PGG2 971 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Slc18a1Q8R090 521 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Afg3l1Q920A7 789 aaKnown RBP24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 MrgbpQ9DAT2 204 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Rnf6Q9DBU5 667 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Gm1604bQ3TRG0 118 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Ankfy1Q810B6 1169 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 1700013H16RikQ9DAC5 291 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Crlf3Q9Z2L7 442 aa24.89■■□□□ 1.58
Sh3rf1-201ENSMUST00000034060 Yeats2Q3TUF7 1407 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Drp2Q05AA6 957 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Recql4Q75NR7 1216 aaKnown RBP24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Fgd4Q91ZT5 766 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 CoasyQ9DBL7 563 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Tmod4Q9JLH8 345 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ddx25Q9QY15 484 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ccnyl1D3YUJ3 367 aa24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Wdr36Q3TAQ9 899 aaKnown RBP24.89■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 4932411N23RikQ8C0S0 470 aa24.89■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms