RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Speer2E9Q9U2 264 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Sema4dO09126 861 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Nr2f2P43135 414 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Snap25P60879 206 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Lrch1P62046 709 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Kiaa1468Q148V7 1216 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 GartQ64737 1010 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gbp9Q8BTS3 619 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 1700109H08RikQ9D9C0 210 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Cetn2Q9R1K9 172 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 DexiQ9WUQ7 95 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Myo3bQ1EG27 1305 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 BcorQ8CGN4 1759 aa11.62□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Prss40A6H6T1 365 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Lonrf2B2RT44 518 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Akr1b1P45376 316 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 TraddQ3U0V2 310 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Sec23ipQ6NZC7 998 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ift74Q8BKE9 600 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Znf830Q8R1N0 363 aaKnown RBP11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ifih1Q8R5F7 1025 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tmco4Q91WU4 631 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tmem39aQ9CYC3 486 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 JmyQ9QXM1 983 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Oip5A2AQ14 241 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Akr1b10G5E895 316 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Rnf216P58283 853 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Olfr121Q5CZY0 321 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Mks1Q5SW45 561 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Baiap3Q80TT2 1134 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 AopepQ8BXQ6 817 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 MtrrQ8C1A3 696 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Fam114a2Q8VE88 497 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 StambpQ9CQ26 424 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Dbndd1Q9CZ00 160 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Cfap57Q9D180 1249 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Speer4f2E9Q366 295 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ccng2O08918 344 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Slc7a1Q09143 622 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Nucks1Q80XU3 234 aaKnown RBP11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Trpa1Q8BLA8 1125 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tldc1Q8K0P3 455 aa11.61□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Rb1P13405 921 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gna11P21278 359 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Lilrb4Q64281 335 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Git1Q68FF6 770 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Usp8Q80U87 1080 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Clec4gQ8BNX1 294 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Slc12a7Q9WVL3 1083 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pde8bE9Q4S1 865 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Mgat1P27808 447 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 VdrP48281 422 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Taok1Q5F2E8 1001 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pabpn1lQ5XFR0 273 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pacsin1Q61644 441 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ppp2r2aQ6P1F6 447 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Haus4Q8BFT2 363 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gcfc2Q8BKT3 769 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tmem134Q8R0J4 195 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gle1Q8R322 699 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Klc3Q91W40 508 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Prpf6Q91YR7 941 aaKnown RBP11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Bcs1lQ9CZP5 418 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ccdc130Q9D516 385 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pck1Q9Z2V4 622 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ubr2Q6WKZ8 1755 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gm7356A0A087WSA6 508 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Fam47eD3YWC7 402 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 MypnQ5DTJ9 1315 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 HrQ61645 1182 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Sp4Q62445 782 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Edrf1Q6GQV7 1239 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Aggf1Q7TN31 711 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ckap2lQ7TS74 745 aa11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pdia6Q922R8 440 aaKnown RBP11.6□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Flt4P35917 1363 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Scgb2b18A0A087WPA9 112 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tcp11x2A2AEI7 503 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Snrpa1P57784 255 aaKnown RBP11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Map3k7clP58500 142 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Atp8b1Q148W0 1251 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Trappc10Q3TLI0 1259 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Dpcr1Q3TNW5 500 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Npdc1Q64322 332 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tbc1d30Q69ZT9 766 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Adck2Q6NSR3 617 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Arhgef18Q6P9R4 1021 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Hps6Q8BLY7 805 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Sash3Q8K352 380 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 OtoaQ8K561 1137 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ube3bQ9ES34 1070 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Mroh6V9GX81 722 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Med23Q80YQ2 1367 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gm10110D3Z5M2 615 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gm28043E0CXC2 719 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tmem132bF7BAB2 1078 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Stag2O35638 1231 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Hsd17b1P51656 344 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Stmn4P63042 189 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Trim43aQ3TL54 445 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms