RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 XlrP05531 208 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mboat4P0C7A3 435 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rnf207Q3V3A7 635 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 CtcfQ61164 736 aaKnown RBP9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ublcp1Q8BGR9 318 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 AtripQ8BMG1 785 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Defb15Q8R2I5 79 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 CpzQ8R4V4 654 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lrrc38A2VDH3 298 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Calb1P12658 261 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lmnb1P14733 588 aaKnown RBP9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nedd4P46935 887 aaKnown RBP9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Chrna5Q2MKA5 467 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Fam198bQ3UPI1 517 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Meis1Q60954 390 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 BC048507Q80ZS7 89 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Kbtbd13Q8C828 458 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Matr3Q8K310 846 aaKnown RBP9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Taf6lQ8R2K4 616 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Acot11Q8VHQ9 594 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Arfgap2Q99K28 520 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mageb16Q9CWV4 363 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Git2Q9JLQ2 708 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Enc1O35709 589 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Pola2P33611 600 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ptpn12P35831 775 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nf2P46662 596 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 NyxP83503 476 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mis18aQ9CZJ6 204 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lman1Q9D0F3 517 aa9.28□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gm5737A0A140LI11 423 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cnnm4Q69ZF7 771 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Epha10Q8BYG9 1007 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gramd4Q8CB44 633 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 GrapQ9CX99 217 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Serpinb8O08800 374 aaKnown RBP9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ripply1Q2WG77 201 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Haus1Q8BHX1 278 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ccdc87Q8CDL9 855 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Trex1Q91XB0 314 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Golga5Q9QYE6 729 aa9.27□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rfpl4bJ3QPR6 266 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Flot1O08917 428 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Yars2Q8BYL4 472 aaKnown RBP9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tut1Q8R3F9 869 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rpf2Q9JJ80 306 aaKnown RBP9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 H2-OaQ9QWV1 250 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Col4a1P02463 1669 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc78D3Z5T1 437 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ppp1r9aH3BJD6 1292 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 H2afxP27661 143 aaKnown RBP9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Pbx1P41778 430 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mmp14P53690 582 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Npr3P70180 536 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Epha7Q61772 998 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tbc1d22bQ80VE5 505 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 PdhbQ9D051 359 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 1700003F12RikA2AKE5 210 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Etnk2A7MCT6 385 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm14525B1AZA0 212 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm2012B1B0R1 212 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fam129cD3YZB0 591 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm4307E9PZY4 289 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm4312K9J7E2 289 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Kcnh2O35219 1162 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Kndc1Q0KK55 1742 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Psg29Q3URN6 468 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 PfasQ5SUR0 1337 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm14819Q62478 212 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Brd2Q7JJ13 798 aaKnown RBP9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Slc51bQ80WK2 128 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Plekhg6Q8R0J1 787 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cep19Q9CQA8 163 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 RnmtQ9D0L8 465 aaKnown RBP9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cmtm5Q9D6G9 156 aa9.27□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm45194A0A140LJG2 572 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Clrn2B2RVW2 232 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Zc3h7bF8VPP8 982 aaKnown RBP9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fgd3O88842 733 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Chp1P61022 195 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fam228aQ8CDW1 299 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Plagl2Q925T4 496 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fyb2A2A995 729 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Skor2A7M7C7 1008 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gad1P48318 593 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Myo1fP70248 1099 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Trim43aQ3TL54 445 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dpcr1Q3TNW5 500 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 H6pdQ8CFX1 789 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Prpf6Q91YR7 941 aaKnown RBP9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rexo5D3YW29 759 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Nol4P60954 483 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gjb6P70689 261 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cep126Q0VBV7 1103 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Edem3Q2HXL6 931 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 HomezQ80W88 542 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ubiad1Q9DC60 336 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Magea10A2AMW4 325 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Arhgap6O54834 987 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Stat3P42227 770 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms