RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tex21Q9R0U9 575 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Ccdc78D3Z5T1 437 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Traf5P70191 558 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Rnpc3Q3UZ01 514 aaKnown RBP13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Foxd4Q60688 444 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Tbx2Q60707 711 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Git1Q68FF6 770 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Fhod1Q6P9Q4 1197 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Lrrc14Q8VC16 493 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gtf2iQ9ESZ8 998 aaKnown RBP13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Tmem191cQ9JJB1 302 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Wdr19Q3UGF1 1341 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gm43738A0A0G2JEA5 862 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Cep126Q0VBV7 1103 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Taok1Q5F2E8 1001 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 AdalQ80SY6 360 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Klhl29Q80T74 875 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Fnbp1Q80TY0 616 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 CnstQ8CBC4 711 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 FibpQ9JI19 357 aa13.9□□□□□ -0.18
Clcn3-201ENSMUST00000004430 Gm4307E9PZY4 289 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gm4312K9J7E2 289 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Eno1P17182 434 aaKnown RBP13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Dok7Q18PE0 504 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Pm20d1Q8C165 503 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Trim9Q8C7M3 817 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Klra17Q9JMA4 273 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Azi2Q9QYP6 405 aa13.9□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Pgrmc1O55022 195 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Pik3caP42337 1068 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Akr1b1P45376 316 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Fam196bQ6GQV1 535 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Kctd3Q8BFX3 815 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Znf76Q8BMU0 568 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Pym1Q8CHP5 203 aaKnown RBP13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Lgi2Q8K4Z0 550 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 GgcxQ9QYC7 757 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Col4a1P02463 1669 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Speer2E9Q9U2 264 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Psmd14O35593 310 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Dnajb6O54946 365 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Fhdc1Q3ULZ2 1149 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ckap2Q3V1H1 664 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Tlr13Q6R5N8 991 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Tldc1Q8K0P3 455 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Eps8l1Q8R5F8 716 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Syf2Q9D198 242 aaKnown RBP13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 JmyQ9QXM1 983 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gja10Q9WUS4 505 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Igsf9bE9PZ19 1328 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Cul4bA2A432 970 aaKnown RBP13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Fbxl16A2RT62 479 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Atp2c2A7L9Z8 944 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Tex13cD3YU32 604 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ifnar1P33896 590 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Wdhd1P59328 1117 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gjb6P70689 261 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Acot6Q32Q92 419 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Q3TTJ4 293 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Zbtb7bQ64321 544 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Kctd6Q8BNL5 237 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Tmem60Q8K174 133 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 RtcbQ99LF4 505 aaKnown RBP13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ranbp17Q99NF8 1088 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Bcl9lQ67FY2 1494 aa13.89□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Cnot10Q8BH15 744 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gga3Q8BMI3 718 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 C130026I21RikQ8C898 291 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Fbxo18Q8K2I9 1042 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gimap4Q99JY3 219 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Tmem47Q9JJG6 181 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ric1Q69ZJ7 1422 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Abca15E9PWH4 1668 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Naaladl2A0A0N4SUJ3 795 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Atp1b3P97370 278 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Adcy8P97490 1249 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Psmd1Q3TXS7 953 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 ItgadQ3V0T4 1168 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Actn1Q7TPR4 892 aaKnown RBP13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ube3cQ80U95 1083 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Rcn2Q8BP92 320 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Lzts2Q91YU6 671 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 CalcbQ99MP3 130 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ddx25Q9QY15 484 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Slc12a7Q9WVL3 1083 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ubr2Q6WKZ8 1755 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Zfp142G5E869 1843 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Arhgap6O54834 987 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Nedd4P46935 887 aaKnown RBP13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Slc10a4Q3UEZ8 437 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Mars2Q499X9 586 aaKnown RBP13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gm10488Q4KL05 212 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Lrig2Q52KR2 1054 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Gm14819Q62478 212 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Nme8Q715T0 586 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Vipas39Q8BGQ1 491 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Krt34Q9D646 392 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Ascc1Q9D8Z1 356 aaKnown RBP13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Snapc4Q8BP86 1333 aa13.88□□□□□ -0.19
Clcn3-201ENSMUST00000004430 Mms22lB1AUR6 1238 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms