RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Fbxo11Q7TPD1 930 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cplx3Q8R1B5 158 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Usp11Q99K46 921 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sh3bp5lQ99LH9 392 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tmem192Q9CXT7 266 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Arl2bpQ9D385 163 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dnajc7Q9QYI3 494 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Psmd10Q9Z2X2 231 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Chd2E9PZM4 1827 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mroh8E9PYI4 1049 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Idh1O88844 414 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gjb6P70689 261 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 EregQ61521 162 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Arhgef19Q8BWA8 802 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Amigo3Q8C2S7 508 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Bst2Q8R2Q8 172 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Bap1Q99PU7 728 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 MefvQ9JJ26 767 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rpf2Q9JJ80 306 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Znf394Q9Z1D9 521 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pcdh11xF6ZNL5 1338 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Esr2O08537 530 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ptpn12P35831 775 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lrig2Q52KR2 1054 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Acbd5Q5XG73 508 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Zbtb7bQ64321 544 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Adam6bQ6IMH7 756 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Kiaa1328Q6NZK5 612 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Hook3Q8BUK6 718 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Q922C1 641 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Smc6Q924W5 1097 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rhobtb3Q9CTN4 611 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Fam133bQ9CVI2 245 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Hsf2bpQ9D4G2 338 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Epb41l3Q9WV92 929 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dlg5E9Q9R9 1921 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sipa1l2Q80TE4 1722 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ccdc78D3Z5T1 437 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Vmn2r79E9Q067 851 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Slurp2P0DP59 97 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Krt19P19001 403 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lmnb2P21619 596 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Agbl1Q09M05 972 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 BC051142Q3V0M8 400 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 ItgadQ3V0T4 1168 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gas7Q60780 421 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Fmnl3Q6ZPF4 1028 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dlg1Q811D0 905 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ccdc87Q8CDL9 855 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Abcf2Q99LE6 628 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 PdhbQ9D051 359 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Irx5Q9JKQ4 484 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 1700003F12RikA2AKE5 210 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nova2D3YVV7 556 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Scgb2b19J3QM75 112 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Vmn2r78K7N6U5 853 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sema4dO09126 861 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dnajc5P60904 198 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Acot6Q32Q92 419 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mier3Q3UHF3 551 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rgl1Q60695 768 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Hdac10Q6P3E7 666 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sash3Q8K352 380 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Emilin2Q8K482 1074 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Psmd2Q8VDM4 908 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mmtag2Q99LX5 260 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tex19.1Q99MV2 351 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pacsin2Q9WVE8 486 aaKnown RBP10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rps6ka4Q9Z2B9 773 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ttc38A3KMP2 465 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Slc27a3O88561 667 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Appl2Q8K3G9 662 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mtmr2Q9Z2D1 643 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Zmym2Q9CU65 1376 aa10.34□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ccdc152E9PX14 254 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Gm4758L7N258 96 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 EgfrQ01279 1210 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 SlmapQ3URD3 845 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Ccdc92bQ5SUE3 299 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Antxr2Q6DFX2 487 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Taok3Q8BYC6 898 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 GzmnQ920S1 248 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Coa7Q921H9 231 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 HgsQ99LI8 775 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Akt1s1Q9D1F4 257 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 3830403N18RikQ9D6C3 208 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Adgrf5G5E8Q8 1348 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Scgb2b11A0A087WR49 112 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Prl2c2P04095 224 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Pik3caP42337 1068 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 WaplQ65Z40 1200 aaKnown RBP10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 IarsQ8BU30 1262 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Znf830Q8R1N0 363 aaKnown RBP10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Slc35f6Q8VE96 372 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Plagl2Q925T4 496 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Syf2Q9D198 242 aaKnown RBP10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Fsip1Q9D3V5 435 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Ybx3Q9JKB3 361 aaKnown RBP10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Lrriq3Q14DL3 633 aa10.33□□□□□ -0.76
Col6a1-201ENSMUST00000001147 Q3TTJ4 293 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms