RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C MCA1Q08601 432 aa5.13□□□□□ -1.59
RAT1YOR048C YPR011CQ12251 326 aa5.13□□□□□ -1.59
RAT1YOR048C SLH1P53327 1967 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C CDC4P07834 779 aa5.13□□□□□ -1.59
RAT1YOR048C RPS4AP0CX35 261 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C RPS4BP0CX36 261 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C SCH9P11792 824 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C SST2P11972 698 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C SEC2P17065 759 aa5.13□□□□□ -1.59
RAT1YOR048C ATG22P25568 528 aa5.13□□□□□ -1.59
RAT1YOR048C APE2P32454 952 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C VPH1P32563 840 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C RAD55P38953 406 aa5.13□□□□□ -1.59
RAT1YOR048C RSP5P39940 809 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C RPH1P39956 796 aa5.13□□□□□ -1.59
RAT1YOR048C LSM5P40089 93 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C AYR1P40471 297 aa5.13□□□□□ -1.59
RAT1YOR048C PRY3P47033 881 aa5.13□□□□□ -1.59
RAT1YOR048C ISM1P48526 1002 aa5.13□□□□□ -1.59
RAT1YOR048C MUP1P50276 574 aa5.13□□□□□ -1.59
RAT1YOR048C SGF73P53165 657 aa5.13□□□□□ -1.59
RAT1YOR048C MRH4P53166 561 aa5.13□□□□□ -1.59
RAT1YOR048C TPS1Q00764 495 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C MET14Q02196 202 aa5.13□□□□□ -1.59
RAT1YOR048C YPS7Q06325 596 aa5.13□□□□□ -1.59
RAT1YOR048C CLP1Q08685 445 aaPredicted RBP5.13□□□□□ -1.59
RAT1YOR048C UAF30Q08747 228 aa5.13□□□□□ -1.59
RAT1YOR048C FRE5Q08908 694 aa5.13□□□□□ -1.59
RAT1YOR048C MCD1Q12158 566 aa5.13□□□□□ -1.59
RAT1YOR048C NDJ1Q12366 352 aa5.13□□□□□ -1.59
RAT1YOR048C KIN2P13186 1147 aaKnown RBP5.12□□□□□ -1.59
RAT1YOR048C MRPL6P32904 214 aa5.12□□□□□ -1.59
RAT1YOR048C JEN1P36035 616 aa5.12□□□□□ -1.59
RAT1YOR048C YAP1801P38856 637 aa5.12□□□□□ -1.59
RAT1YOR048C YER034WP40022 185 aaKnown RBP5.12□□□□□ -1.59
RAT1YOR048C YGR266WP53326 701 aa5.12□□□□□ -1.59
RAT1YOR048C EFM6P53970 246 aa5.12□□□□□ -1.59
RAT1YOR048C ATG34Q12292 412 aa5.12□□□□□ -1.59
RAT1YOR048C FMP16Q12497 93 aa5.12□□□□□ -1.59
RAT1YOR048C TY4B-PA0A0B7P3V8 1104 aa5.12□□□□□ -1.59
RAT1YOR048C PET9P18239 318 aaKnown RBP5.12□□□□□ -1.59
RAT1YOR048C PTC6P25646 442 aa5.12□□□□□ -1.59
RAT1YOR048C ASF2P32448 525 aaPredicted RBP5.12□□□□□ -1.59
RAT1YOR048C HCS1P34243 683 aa5.12□□□□□ -1.59
RAT1YOR048C STB5P38699 743 aa5.12□□□□□ -1.59
RAT1YOR048C INM1P38710 295 aa5.12□□□□□ -1.59
RAT1YOR048C YGR210CP42942 411 aa5.12□□□□□ -1.59
RAT1YOR048C YDL073WQ07454 984 aa5.12□□□□□ -1.59
RAT1YOR048C YGL194C-AQ2V2P6 80 aa5.12□□□□□ -1.59
RAT1YOR048C RPL6BP05739 176 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C KGD1P20967 1014 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C MRPL8P22353 238 aa5.11□□□□□ -1.59
RAT1YOR048C TRX3P25372 127 aa5.11□□□□□ -1.59
RAT1YOR048C DSS4P32601 143 aa5.11□□□□□ -1.59
RAT1YOR048C LIP5P32875 414 aa5.11□□□□□ -1.59
RAT1YOR048C GRE3P38715 327 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
RAT1YOR048C PCL6P40038 420 aa5.11□□□□□ -1.59
RAT1YOR048C SHY1P53266 389 aa5.11□□□□□ -1.59
RAT1YOR048C COP1P53622 1201 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C MPS1P54199 764 aa5.11□□□□□ -1.59
RAT1YOR048C SPP2Q02521 185 aa5.11□□□□□ -1.59
RAT1YOR048C DLT1Q04216 342 aa5.11□□□□□ -1.59
RAT1YOR048C SSK1Q07084 712 aa5.11□□□□□ -1.59
RAT1YOR048C COS7Q07788 383 aa5.11□□□□□ -1.59
RAT1YOR048C RRG7Q08774 242 aaPredicted RBP5.11□□□□□ -1.59
RAT1YOR048C YTM1Q12024 460 aaPredicted RBP5.11□□□□□ -1.59
RAT1YOR048C YLR046CQ12253 270 aa5.11□□□□□ -1.59
RAT1YOR048C RAD52P06778 471 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C PET309P32522 965 aaPredicted RBP5.11□□□□□ -1.59
RAT1YOR048C PRP19P32523 503 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C RPS1AP33442 255 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C MAP2P38174 421 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C BMT2P38278 337 aa5.11□□□□□ -1.59
RAT1YOR048C TPA1P40032 644 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C SSY5P47002 699 aa5.11□□□□□ -1.59
RAT1YOR048C HAM1P47119 197 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C ARH1P48360 493 aa5.11□□□□□ -1.59
RAT1YOR048C TPN1P53099 579 aa5.11□□□□□ -1.59
RAT1YOR048C ATF2P53296 535 aa5.11□□□□□ -1.59
RAT1YOR048C GRX8Q05926 109 aa5.11□□□□□ -1.59
RAT1YOR048C DBP9Q06218 594 aaKnown RBP5.11□□□□□ -1.59
RAT1YOR048C MCP2Q06567 569 aa5.11□□□□□ -1.59
RAT1YOR048C CDA2Q06703 312 aa5.11□□□□□ -1.59
RAT1YOR048C MFG1Q07684 458 aa5.11□□□□□ -1.59
RAT1YOR048C YLR036CQ07986 203 aa5.11□□□□□ -1.59
RAT1YOR048C CRT10Q08226 957 aa5.11□□□□□ -1.59
RAT1YOR048C BUD7Q08754 746 aa5.11□□□□□ -1.59
RAT1YOR048C RIB3Q99258 208 aa5.11□□□□□ -1.59
RAT1YOR048C IRA1P18963 3092 aa5.11□□□□□ -1.59
RAT1YOR048C FUM1P08417 488 aaKnown RBP5.1□□□□□ -1.59
RAT1YOR048C NAR1P23503 491 aaKnown RBP5.1□□□□□ -1.59
RAT1YOR048C YIM1P28625 365 aa5.1□□□□□ -1.59
RAT1YOR048C KAP122P32767 1081 aa5.1□□□□□ -1.59
RAT1YOR048C EMC3P36039 253 aa5.1□□□□□ -1.59
RAT1YOR048C STB6P36085 766 aa5.1□□□□□ -1.59
RAT1YOR048C RIB1P38066 345 aa5.1□□□□□ -1.59
RAT1YOR048C YBR284WP38150 797 aa5.1□□□□□ -1.59
RAT1YOR048C YBR137WP38276 179 aa5.1□□□□□ -1.59
RAT1YOR048C LEU5P38702 357 aa5.1□□□□□ -1.59
RAT1YOR048C FET3P38993 636 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms