RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B MF(ALPHA)2P32435 120 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B YHR210CP38893 341 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B TOS3P43637 560 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B CCC1P47818 322 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B ATG21Q02887 496 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B HEL2Q05580 639 aaKnown RBP3.31□□□□□ -1.88
YLR227W-BYLR227W-B YLL056CQ12177 298 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B HRB1P38922 454 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
YLR227W-BYLR227W-B CAJ1P39101 391 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B RTS2P40962 232 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B IDS2P46958 469 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B MSI1P13712 422 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B PRS4P38063 326 aaPredicted RBP3.31□□□□□ -1.88
YLR227W-BYLR227W-B YJL016WP47072 561 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B GUP1P53154 560 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B OLA1P38219 394 aaKnown RBP3.31□□□□□ -1.88
YLR227W-BYLR227W-B AIM22P47051 409 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B YPL039WQ03080 316 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B TAF12Q03761 539 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B URC2Q04411 772 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B NUT2Q06213 157 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B KRR1P25586 316 aaPredicted RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B CDC3P32457 520 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B YKT6P36015 200 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B YBR139WP38109 508 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B ULP2P40537 1034 aaPredicted RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B FKH2P41813 862 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B RET2P43621 546 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B LCL3P53153 274 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B VMS1Q04311 632 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B HLR1Q04429 423 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B YEL077CQ3E7X8 1277 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B MSB1P21339 1137 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B URA7P28274 579 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B YBR144CP34215 104 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B ARG2P40360 574 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B YML6P51998 286 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B SUT1P53032 299 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B MDM34P53083 459 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B YPL108WQ02872 168 aaPredicted RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B STP3Q05937 343 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B UIP4Q08926 304 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B CKA1P15790 372 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B STO1P34160 861 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B LRO1P40345 661 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B AXL1P40851 1208 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B TFG2P41896 400 aaPredicted RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B ROG1P53118 685 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B MRH4P53166 561 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B MNT4P53745 580 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B RSC9Q03124 581 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B HBT1Q07653 1046 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B ELG1Q12050 791 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B VAM3Q12241 283 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B BMT6Q12291 365 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B RRI1Q12468 440 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B COX1P00401 534 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B BIK1P11709 440 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B ERD1P16151 362 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B PRP28P23394 588 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B MRPL39P36533 70 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B ECM2P38241 364 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B SEN34P39707 275 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B TMA108P40462 946 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B YJR039WP47107 1121 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B JSN1P47135 1091 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
YLR227W-BYLR227W-B AIF1P52923 378 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B HRI1Q05905 244 aaKnown RBP3.3□□□□□ -1.88
YLR227W-BYLR227W-B AI5_ALPHAQ9ZZX1 630 aa3.3□□□□□ -1.88
YLR227W-BYLR227W-B RAD7P06779 565 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B ITR2P30606 609 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B MSN2P33748 704 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B SCD5P34758 872 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B TUL1P36096 758 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B RTC3P38804 111 aaPredicted RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B CIK1Q01649 594 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B YOL075CQ08234 1294 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B YBL113CQ7M4S9 792 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B GSC2P40989 1895 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B LEU1P07264 779 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B RPL19AP0CX82 189 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B RPL19BP0CX83 189 aaPredicted RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B IML3P38265 245 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B ARO9P38840 513 aaPredicted RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B FAD1P38913 306 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B GCN20P43535 752 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B AIP1P46680 615 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B TNA1P53322 534 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B YMR034CQ05131 434 aaPredicted RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B DCR2Q05924 578 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B CHS5Q12114 671 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B REP2P03872 296 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B NPL6P32832 435 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B SKN1P33336 771 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B PRS2P38620 318 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B LSG1P53145 640 aaKnown RBP3.29□□□□□ -1.88
YLR227W-BYLR227W-B NRD1P53617 575 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YLR227W-BYLR227W-B SDC1Q03323 175 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B HED1Q03937 162 aa3.29□□□□□ -1.88
YLR227W-BYLR227W-B KIN2P13186 1147 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms