RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C TRP1P00912 224 aa2.89□□□□□ -1.95
ATG38YLR211C TOP1P04786 769 aa2.89□□□□□ -1.95
ATG38YLR211C DAL2P25335 343 aa2.89□□□□□ -1.95
ATG38YLR211C AFG1P32317 509 aa2.89□□□□□ -1.95
ATG38YLR211C PRP21P32524 280 aaPredicted RBP2.89□□□□□ -1.95
ATG38YLR211C ECM25P32525 599 aa2.89□□□□□ -1.95
ATG38YLR211C UTH1P36135 365 aa2.89□□□□□ -1.95
ATG38YLR211C CBP4P37267 147 aa2.89□□□□□ -1.95
ATG38YLR211C MET18P40469 1032 aa2.89□□□□□ -1.95
ATG38YLR211C HER2Q03557 464 aa2.89□□□□□ -1.95
ATG38YLR211C YMR027WQ04371 470 aa2.89□□□□□ -1.95
ATG38YLR211C CYC3P06182 269 aa2.88□□□□□ -1.95
ATG38YLR211C RHO2P06781 192 aa2.88□□□□□ -1.95
ATG38YLR211C PCL1P24867 279 aa2.88□□□□□ -1.95
ATG38YLR211C OCA4P25366 362 aa2.88□□□□□ -1.95
ATG38YLR211C RAD14P28519 371 aa2.88□□□□□ -1.95
ATG38YLR211C NIP100P33420 868 aa2.88□□□□□ -1.95
ATG38YLR211C CMC1P36064 111 aa2.88□□□□□ -1.95
ATG38YLR211C JJJ1P53863 590 aa2.88□□□□□ -1.95
ATG38YLR211C NCS2P53923 493 aaPredicted RBP2.88□□□□□ -1.95
ATG38YLR211C SYF1Q04048 859 aaPredicted RBP2.88□□□□□ -1.95
ATG38YLR211C PPM1Q04081 328 aa2.88□□□□□ -1.95
ATG38YLR211C YDR387CQ04162 555 aa2.88□□□□□ -1.95
ATG38YLR211C TIM18Q08749 192 aa2.88□□□□□ -1.95
ATG38YLR211C MUM3Q08750 479 aa2.88□□□□□ -1.95
ATG38YLR211C ATG29Q12092 213 aa2.88□□□□□ -1.95
ATG38YLR211C PKH2Q12236 1081 aaKnown RBP2.88□□□□□ -1.95
ATG38YLR211C YLR278CQ05854 1341 aa2.88□□□□□ -1.95
ATG38YLR211C SEC63P14906 663 aa2.87□□□□□ -1.95
ATG38YLR211C SLY1P22213 666 aa2.87□□□□□ -1.95
ATG38YLR211C IDH2P28241 369 aaKnown RBP2.87□□□□□ -1.95
ATG38YLR211C IMP2'P32351 346 aa2.87□□□□□ -1.95
ATG38YLR211C GYP6P32806 458 aa2.87□□□□□ -1.95
ATG38YLR211C MNS1P32906 549 aa2.87□□□□□ -1.95
ATG38YLR211C VID24P38263 362 aa2.87□□□□□ -1.95
ATG38YLR211C BRO1P48582 844 aa2.87□□□□□ -1.95
ATG38YLR211C RSN1Q03516 953 aa2.87□□□□□ -1.95
ATG38YLR211C ARG3P05150 338 aa2.86□□□□□ -1.95
ATG38YLR211C GFD2P25370 566 aaKnown RBP2.86□□□□□ -1.95
ATG38YLR211C GPI10P30777 616 aa2.86□□□□□ -1.95
ATG38YLR211C YHR131CP38835 850 aa2.86□□□□□ -1.95
ATG38YLR211C HXT14P42833 540 aa2.86□□□□□ -1.95
ATG38YLR211C RMD8P43620 662 aa2.86□□□□□ -1.95
ATG38YLR211C SSN8P47821 323 aa2.86□□□□□ -1.95
ATG38YLR211C FRE4P53746 719 aa2.86□□□□□ -1.95
ATG38YLR211C HAL1Q01766 294 aa2.86□□□□□ -1.95
ATG38YLR211C HSP31Q04432 237 aa2.86□□□□□ -1.95
ATG38YLR211C YML133CQ03099 1374 aa2.86□□□□□ -1.95
ATG38YLR211C YLL067CQ07888 1374 aa2.86□□□□□ -1.95
ATG38YLR211C YLL066CQ99208 1374 aa2.86□□□□□ -1.95
ATG38YLR211C KAR9P32526 644 aa2.85□□□□□ -1.95
ATG38YLR211C SAS2P40963 338 aa2.85□□□□□ -1.95
ATG38YLR211C RMD9P53140 646 aaKnown RBP2.85□□□□□ -1.95
ATG38YLR211C YNR048WP53740 393 aa2.85□□□□□ -1.95
ATG38YLR211C CWC25P53854 179 aaKnown RBP2.85□□□□□ -1.95
ATG38YLR211C APJ1P53940 528 aa2.85□□□□□ -1.95
ATG38YLR211C YMR181CQ03231 154 aa2.85□□□□□ -1.95
ATG38YLR211C SNX3Q08826 162 aaKnown RBP2.85□□□□□ -1.95
ATG38YLR211C ORT1Q12375 292 aa2.85□□□□□ -1.95
ATG38YLR211C RTP1Q12751 981 aa2.85□□□□□ -1.95
ATG38YLR211C APE2P32454 952 aaKnown RBP2.84□□□□□ -1.95
ATG38YLR211C DSL1P53847 754 aa2.84□□□□□ -1.95
ATG38YLR211C RPT6Q01939 405 aaKnown RBP2.84□□□□□ -1.95
ATG38YLR211C PEX25Q02969 394 aa2.84□□□□□ -1.95
ATG38YLR211C RQC1Q05468 723 aaKnown RBP2.84□□□□□ -1.95
ATG38YLR211C GRX6Q12438 231 aa2.84□□□□□ -1.95
ATG38YLR211C ILV5P06168 395 aaKnown RBP2.83□□□□□ -1.96
ATG38YLR211C RIP1P08067 215 aa2.83□□□□□ -1.96
ATG38YLR211C PPH22P23595 377 aa2.83□□□□□ -1.96
ATG38YLR211C HXT3P32466 567 aaKnown RBP2.83□□□□□ -1.96
ATG38YLR211C MRPL10P36520 322 aa2.83□□□□□ -1.96
ATG38YLR211C RFC3P38629 340 aa2.83□□□□□ -1.96
ATG38YLR211C ECM27P47144 725 aa2.83□□□□□ -1.96
ATG38YLR211C YIF1P53845 314 aaKnown RBP2.83□□□□□ -1.96
ATG38YLR211C AHC1Q12433 566 aa2.83□□□□□ -1.96
ATG38YLR211C RMD5Q12508 421 aa2.83□□□□□ -1.96
ATG38YLR211C TEF1P02994 458 aaKnown RBP2.82□□□□□ -1.96
ATG38YLR211C RPI1P23250 407 aaKnown RBP2.82□□□□□ -1.96
ATG38YLR211C REC114P32841 428 aa2.82□□□□□ -1.96
ATG38YLR211C MRP21P38175 177 aa2.82□□□□□ -1.96
ATG38YLR211C LYS1P38998 373 aaRIP-Chip data2.82□□□□□ -1.96not detected
ATG38YLR211C RIM20Q12033 661 aa2.82□□□□□ -1.96
ATG38YLR211C SPS4P09937 338 aa2.81□□□□□ -1.96
ATG38YLR211C HSP26P15992 214 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
ATG38YLR211C MDM30Q05930 598 aa2.81□□□□□ -1.96
ATG38YLR211C MED1Q12321 566 aa2.81□□□□□ -1.96
ATG38YLR211C HIS4P00815 799 aaKnown RBP2.8□□□□□ -1.96
ATG38YLR211C RAD57P25301 460 aa2.8□□□□□ -1.96
ATG38YLR211C LSB5P25369 354 aa2.8□□□□□ -1.96
ATG38YLR211C POP5P28005 173 aa2.8□□□□□ -1.96
ATG38YLR211C NUP2P32499 720 aa2.8□□□□□ -1.96
ATG38YLR211C MUD1P32605 298 aaKnown RBP2.8□□□□□ -1.96
ATG38YLR211C SWE1P32944 819 aa2.8□□□□□ -1.96
ATG38YLR211C CSE2P33308 149 aa2.8□□□□□ -1.96
ATG38YLR211C KKQ8P36004 724 aa2.8□□□□□ -1.96
ATG38YLR211C SMF1P38925 575 aa2.8□□□□□ -1.96
ATG38YLR211C VTC2P43585 828 aa2.8□□□□□ -1.96
ATG38YLR211C SIL1Q08199 421 aa2.8□□□□□ -1.96
ATG38YLR211C BUD21Q08492 214 aaPredicted RBP2.8□□□□□ -1.96
ATG38YLR211C FAB1P34756 2278 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms