RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	RAS2	P01120	322 aa	Known RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	MET8	P15807	274 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	PEX34	P25584	144 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	PEX3	P28795	441 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	SFP1	P32432	683 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	LHS1	P36016	881 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	SPC34	P36131	295 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	BMT2	P38278	337 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	DBP8	P38719	431 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	LRP1	P38801	184 aa	Known RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	DUN1	P39009	513 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	RSP5	P39940	809 aa	Known RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	RGI1	P40043	161 aa	Predicted RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	ELP2	P42935	788 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	RMD8	P43620	662 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	STB2	P46679	850 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	NNF1	P47149	201 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	SRL4	Q03085	281 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	VHS1	Q03785	461 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	YHC1	Q05900	231 aa	Known RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	GPI11	Q06636	219 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	LOT6	Q07923	191 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	RRP42	Q12277	265 aa	Predicted RBP	5.86	□□□□□ -1.47
RPT3	YDR394W	RPN6	Q12377	434 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	YCL012C	Q8J0M4	134 aa		5.86	□□□□□ -1.47
RPT3	YDR394W	PHO5	P00635	467 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	ARG81	P05085	880 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	RAD7	P06779	565 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	RHO1	P06780	209 aa	Known RBP	5.85	□□□□□ -1.47
RPT3	YDR394W	STE3	P06783	470 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	PEX1	P24004	1043 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	DPB2	P24482	689 aa	Predicted RBP	5.85	□□□□□ -1.47
RPT3	YDR394W	RPS5	P26783	225 aa	Known RBP	5.85	□□□□□ -1.47
RPT3	YDR394W	PTP2	P29461	750 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	PRO1	P32264	428 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	CDC5	P32562	705 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	CYS4	P32582	507 aa	Known RBP	5.85	□□□□□ -1.47
RPT3	YDR394W	PXA2	P34230	853 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	FMP10	P40098	244 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	MSS2	P40990	351 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	YGL176C	P46945	554 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	GLG2	P47011	380 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	FRE4	P53746	719 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	SPR6	Q01684	191 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	NSE5	Q03718	556 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	SMP3	Q04174	516 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	RSC3	Q06639	885 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	RAD34	Q06665	692 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	MFG1	Q07684	458 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	YLL007C	Q07799	665 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	PER33	Q12144	273 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	NTO1	Q12311	748 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	DBP10	Q12389	995 aa	Known RBP	5.85	□□□□□ -1.47
RPT3	YDR394W	MHF2	Q3E829	80 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	MDM12	Q92328	271 aa		5.85	□□□□□ -1.47
RPT3	YDR394W	CPA1	P07258	411 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	DST1	P07273	309 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	EPT1	P22140	391 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	ARP2	P32381	391 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	SDH3	P33421	198 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	RIB1	P38066	345 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	YBR071W	P38243	211 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	YBR138C	P38277	524 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	PCL5	P38794	229 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MTG2	P38860	518 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MTW1	P39731	289 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	SPF1	P39986	1215 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	YRB2	P40517	327 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MEP2	P41948	499 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MET12	P46151	657 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	AIM22	P47051	409 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	TOM22	P49334	152 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MDM34	P53083	459 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	FLC3	P53121	802 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	YNL260C	P53846	198 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MPS1	P54199	764 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	SWP1	Q02795	286 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	LEE1	Q02799	301 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	YMR178W	Q03219	274 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	YMR010W	Q03687	405 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	CLU1	Q03690	1277 aa	Known RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	FMP42	Q04991	504 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	COS7	Q07788	383 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	THP1	Q08231	455 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	RSB1	Q08417	382 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	SMF3	Q12078	473 aa	Predicted RBP	5.84	□□□□□ -1.47
RPT3	YDR394W	MLH3	Q12083	715 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	MSH5	Q12175	901 aa		5.84	□□□□□ -1.47
RPT3	YDR394W	TPK3	P05986	398 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	GPH1	P06738	902 aa	Known RBP	5.83	□□□□□ -1.48
RPT3	YDR394W	CDC21	P06785	304 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	SAM35	P14693	329 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	DAP2	P18962	818 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	PRI2	P20457	528 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	PHO84	P25297	587 aa	Known RBP	5.83	□□□□□ -1.48
RPT3	YDR394W	CTR86	P25355	563 aa		5.83	□□□□□ -1.48
RPT3	YDR394W	VMA6	P32366	345 aa	Known RBP	5.83	□□□□□ -1.48
RPT3	YDR394W	SAC1	P32368	623 aa	Known RBP	5.83	□□□□□ -1.48
RPT3	YDR394W	RPT5	P33297	434 aa	Known RBP	5.83	□□□□□ -1.48
RPT3	YDR394W	GLG1	P36143	616 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms