RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 CACNA1SQ13698 1873 aa8.78□□□□□ -1
RTTN-223ENST00000640931 POLRMTO00411 1230 aaKnown RBP8.77□□□□□ -1
RTTN-223ENST00000640931 IFIT3O14879 490 aaKnown RBP8.77□□□□□ -1
RTTN-223ENST00000640931 APBA3O96018 575 aa8.77□□□□□ -1
RTTN-223ENST00000640931 PPARAQ07869 468 aa8.77□□□□□ -1
RTTN-223ENST00000640931 USH1GQ495M9 461 aa8.77□□□□□ -1
RTTN-223ENST00000640931 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1
RTTN-223ENST00000640931 POTEGQ6S5H5 508 aa8.77□□□□□ -1
RTTN-223ENST00000640931 NCCRP1Q6ZVX7 275 aaPredicted RBP8.77□□□□□ -1
RTTN-223ENST00000640931 RSPH3Q86UC2 560 aa8.77□□□□□ -1
RTTN-223ENST00000640931 UHMK1Q8TAS1 419 aaKnown RBP8.77□□□□□ -1
RTTN-223ENST00000640931 USP33Q8TEY7 942 aa8.77□□□□□ -1
RTTN-223ENST00000640931 CTNNBL1Q8WYA6 563 aaPredicted RBP8.77□□□□□ -1
RTTN-223ENST00000640931 TBC1D31Q96DN5 1066 aa8.77□□□□□ -1
RTTN-223ENST00000640931 ANKRD27Q96NW4 1050 aa8.77□□□□□ -1
RTTN-223ENST00000640931 MXD3Q9BW11 206 aa8.77□□□□□ -1
RTTN-223ENST00000640931 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1
RTTN-223ENST00000640931 GOLPH3LQ9H4A5 285 aa8.77□□□□□ -1
RTTN-223ENST00000640931 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 BUB1BO60566 1050 aaPredicted RBP8.77□□□□□ -1.01
RTTN-223ENST00000640931 MSL3P1P0C860 447 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
RTTN-223ENST00000640931 KRT85P78386 507 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 ALX1Q15699 326 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 WHAMMP3Q1A5X7 153 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 FAM47AQ5JRC9 791 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 THOC7Q6I9Y2 204 aaKnown RBP8.77□□□□□ -1.01
RTTN-223ENST00000640931 APOA5Q6Q788 366 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 CKAP2LQ8IYA6 745 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 MAIP1Q8WWC4 291 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 OPTNQ96CV9 577 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 TCHPQ9BT92 498 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.77□□□□□ -1.01
RTTN-223ENST00000640931 ANGEL1Q9UNK9 670 aaKnown RBP8.77□□□□□ -1.01
RTTN-223ENST00000640931 ATP6V0A2Q9Y487 856 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 ATP6V1DQ9Y5K8 247 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 CLIC4Q9Y696 253 aa8.77□□□□□ -1.01
RTTN-223ENST00000640931 MYH13Q9UKX3 1938 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 GPR75-ASB3A0A0A6YYF3 556 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 A0A1B0GVG6 124 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 LRRD1A4D1F6 860 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 USP17L21D6R901 530 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 ATP9BO43861 1147 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 NR1I2O75469 434 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 VIMP08670 466 aaKnown RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 TROVE2P10155 538 aaKnown RBP eCLIP8.76□□□□□ -1.01
RTTN-223ENST00000640931 PDE6BP35913 854 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 METAP2P50579 478 aaKnown RBP eCLIP8.76□□□□□ -1.01
RTTN-223ENST00000640931 OXCT1P55809 520 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 MFSD6Q6ZSS7 791 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 TEKT4Q8WW24 435 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 RPGRQ92834 1020 aaKnown RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 LLPHQ9BRT6 129 aaKnown RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 OSBPL10Q9BXB5 764 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 UBE2OQ9C0C9 1292 aaKnown RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 KAT14Q9H8E8 782 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 POLLQ9UGP5 575 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 ASB3Q9Y575 518 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 SPO11Q9Y5K1 396 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 UBR3Q6ZT12 1888 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 BAZ2AQ9UIF9 1905 aaKnown RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 STXBP3O00186 592 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 P4HA2O15460 535 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 UFL1O94874 794 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 PDCP20941 246 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 ARPC4P59998 168 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 TRIM65Q6PJ69 517 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 NANOGNBQ7Z5D8 188 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 SH3RF3Q8TEJ3 882 aaPredicted RBP8.76□□□□□ -1.01
RTTN-223ENST00000640931 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 SHISA4Q96DD7 197 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 DYNLL2Q96FJ2 89 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 EPC1Q9H2F5 836 aa8.76□□□□□ -1.01
RTTN-223ENST00000640931 TARSL2A2RTX5 802 aaKnown RBP8.75□□□□□ -1.01
RTTN-223ENST00000640931 GOLGA6L4A6NEF3 574 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 BECN2A8MW95 431 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 CPLX1O14810 134 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 SH3BP5O60239 455 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 KDM1AO60341 852 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 SYF2O95926 243 aaKnown RBP8.75□□□□□ -1.01
RTTN-223ENST00000640931 ABL1P00519 1130 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 EIF2B5Q13144 721 aaKnown RBP8.75□□□□□ -1.01
RTTN-223ENST00000640931 NTRK3Q16288 839 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 MAP7D1Q3KQU3 841 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 ANO6Q4KMQ2 910 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 EMC10Q5UCC4 262 aa8.75□□□□□ -1.01
RTTN-223ENST00000640931 RASGRP2Q7LDG7 609 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms