RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 MYO10Q9HD67 2058 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 MYH7BA7E2Y1 1941 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 KIAA1217Q5T5P2 1943 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 ZNF292O60281 2723 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-226ENST00000640916 DPYSL4O14531 572 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCARB2-226ENST00000640916 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-226ENST00000640916 EDNRBP24530 442 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
SCARB2-226ENST00000640916 SBK1Q52WX2 424 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 NSMFQ6X4W1 530 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 AACSQ86V21 672 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 SMRP1Q8NCR6 262 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 STAG1Q8WVM7 1258 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 TOP1MTQ969P6 601 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 HDAC6Q9UBN7 1215 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 GTF2IRD1Q9UHL9 959 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 SYNPO2Q9UMS6 1093 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 KIAA1671Q9BY89 1806 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 WDR87Q6ZQQ6 2873 aa9.67□□□□□ -0.86
SCARB2-226ENST00000640916 CFAP47Q6ZTR5 3102 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 LOC102724159A0A0B4J2E5 919 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PLA2G6O60733 806 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 AMHP03971 560 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 MMP3P08254 477 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 STAT2P52630 851 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 ZNF200P98182 395 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PTK7Q13308 1070 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PPP2R5BQ15173 497 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PWP2Q15269 919 aaKnown RBP9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PLEKHG4Q58EX7 1191 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 CCDC62Q6P9F0 684 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 ADSSL1Q8N142 457 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 RMDN1Q96DB5 314 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 PUS7LQ9H0K6 701 aaKnown RBP9.66□□□□□ -0.86
SCARB2-226ENST00000640916 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
SCARB2-226ENST00000640916 NFIBO00712 420 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 GLP2RO95838 553 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 COASYQ13057 564 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-226ENST00000640916 FRMD5Q7Z6J6 570 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 FAM160B2Q86V87 743 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 AMOTL1Q8IY63 956 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 TMEM105Q8N8V8 129 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 SCFD2Q8WU76 684 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 CHURC1Q8WUH1 139 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 AFG1LQ8WV93 481 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 CHMP4CQ96CF2 233 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 RIPOR3Q96MK2 946 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 YME1L1Q96TA2 773 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.86
SCARB2-226ENST00000640916 LMAN2LQ9H0V9 348 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.86
SCARB2-226ENST00000640916 PLIN4Q96Q06 1357 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 RAD50Q92878 1312 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 HAS3O00219 553 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 PRDM1O75626 825 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 TTLL1O95922 423 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 RB1P06400 928 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ARP10275 920 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 TXNP10599 105 aaKnown RBP9.64□□□□□ -0.87
SCARB2-226ENST00000640916 MCCP23508 829 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 DNAJB1P25685 340 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ICAM3P32942 547 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 BMPR1AP36894 532 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ARHGAP1Q07960 439 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 SLC30A10Q6XR72 485 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ADGRD2Q7Z7M1 963 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 CLEC4DQ8WXI8 215 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 CLUAP1Q96AJ1 413 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 CNTNAP3BQ96NU0 1288 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 CNTNAP3Q9BZ76 1288 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 RC3H2Q9HBD1 1191 aaKnown RBP9.64□□□□□ -0.87
SCARB2-226ENST00000640916 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 IL1RAPL2Q9NP60 686 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 INCENPQ9NQS7 918 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ARPP21Q9UBL0 812 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-226ENST00000640916 ADD3Q9UEY8 706 aaKnown RBP9.64□□□□□ -0.87
SCARB2-226ENST00000640916 CCPG1Q9ULG6 757 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 USP15Q9Y4E8 981 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-226ENST00000640916 PLXNA4Q9HCM2 1894 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 FRYLO94915 3013 aa9.64□□□□□ -0.87
SCARB2-226ENST00000640916 KDM4AO75164 1064 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms