RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 FAM20AQ96MK3 541 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 ZNF577Q9BSK1 485 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 CSRNP2Q9H175 543 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 KCNMB3Q9NPA1 279 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 SLC5A4Q9NY91 659 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
HLA-B-258ENST00000640615 A0A1W2PQ27 194 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 A0A1W2PQ64 194 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 A0A1W2PQD8 194 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 CYP2B6P20813 491 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 CMA1P23946 247 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 EDNRBP24530 442 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 LONP1P36776 959 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 GNPTABQ3T906 1256 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 SHC4Q6S5L8 630 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 SEPT14Q6ZU15 432 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 EEPD1Q7L9B9 569 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 CTU1Q7Z7A3 348 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 GPT2Q8TD30 523 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 SOCS4Q8WXH5 440 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 MRPS27Q92552 414 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 RAB34Q9BZG1 259 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 ARHGAP39Q9C0H5 1083 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 TTC12Q9H892 705 aaPredicted RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 AGO4Q9HCK5 861 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 KCNH7Q9NS40 1196 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 PCDHA12Q9UN75 941 aa9.9□□□□□ -0.82
HLA-B-258ENST00000640615 DIS3Q9Y2L1 958 aaKnown RBP9.9□□□□□ -0.82
HLA-B-258ENST00000640615 LOC102724159A0A0B4J2E5 919 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 A0A1B0GVL5 298 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 GPR25O00155 361 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 IPO5O00410 1097 aaKnown RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 TRAK2O60296 914 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 GAS7O60861 476 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 MBD3O95983 291 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 LIG1P18858 919 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 CTGFP29279 349 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 RGS2P41220 211 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 PWP2Q15269 919 aaKnown RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 PKN2Q16513 984 aaKnown RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 LRCH2Q5VUJ6 765 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 RESP18Q5W5W9 173 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 ARMCX2Q7L311 632 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 ZNF467Q7Z7K2 595 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 NPLOC4Q8TAT6 608 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 MORC4Q8TE76 937 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 SLC5A5Q92911 643 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 EPSTI1Q96J88 318 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 MAML3Q96JK9 1138 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 CDHR1Q96JP9 859 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 INPP4AQ96PE3 977 aaPredicted RBP9.89□□□□□ -0.83
HLA-B-258ENST00000640615 GOLPH3LQ9H4A5 285 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 GJD2Q9UKL4 321 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 HTTP42858 3142 aa9.89□□□□□ -0.83
HLA-B-258ENST00000640615 RBBP6Q7Z6E9 1792 aaKnown RBP9.88□□□□□ -0.83
HLA-B-258ENST00000640615 MYH15Q9Y2K3 1946 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 PP2D1A8MPX8 630 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 SPATA31C2B4DYI2 1134 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
HLA-B-258ENST00000640615 MAFGO15525 162 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 ATP9AO75110 1047 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 RGS20O76081 388 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 PFKFB1P16118 471 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 CDC25AP30304 524 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 TXLNAP40222 546 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 UBA7P41226 1012 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 NDUFA8P51970 172 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 PDIA5Q14554 519 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 NCAPH2Q6IBW4 605 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 MAMDC4Q6UXC1 1216 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 USP49Q70CQ1 688 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 RASSF8Q8NHQ8 419 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 USP6NLQ92738 828 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 AK8Q96MA6 479 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 RIT2Q99578 217 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 SDF4Q9BRK5 362 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 TEKT3Q9BXF9 490 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 PANK2Q9BZ23 570 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.88□□□□□ -0.83
HLA-B-258ENST00000640615 LRWD1Q9UFC0 647 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 KCNH3Q9ULD8 1083 aa9.88□□□□□ -0.83
HLA-B-258ENST00000640615 POTEMA6NI47 508 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 CHMP2AO43633 222 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 SORBS3O60504 671 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 FKTNO75072 461 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 PSMD10O75832 226 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 HOXC6P09630 235 aa9.87□□□□□ -0.83
HLA-B-258ENST00000640615 HOXD10P28358 340 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms