RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 ICAM3P32942 547 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 MCM7P33993 719 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 ORC2Q13416 577 aaPredicted RBP24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 IQSEC1Q6DN90 963 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 MCOLN1Q9GZU1 580 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 ATP6V1DQ9Y5K8 247 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 CENPFP49454 3210 aa24.46■■□□□ 1.51
TSPAN9-208ENST00000640568 HTTP42858 3142 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 IGLV3-22A0A075B6J6 115 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 NEMFO60524 1076 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 TXNP10599 105 aaKnown RBP24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 TGFB3P10600 412 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 CCND3P30281 292 aaPredicted RBP24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 NBR1Q14596 966 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 ZNF174Q15697 407 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 TRPV1Q8NER1 839 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 KCNH7Q9NS40 1196 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 CHMP5Q9NZZ3 219 aa24.45■■□□□ 1.51
TSPAN9-208ENST00000640568 RBM47A0AV96 593 aaKnown RBP24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 SEPT4O43236 478 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 SLC37A4O43826 429 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 ARP10275 920 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 TOB1P50616 345 aaPredicted RBP24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 TNFAIP2Q03169 654 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 FOXD4L6Q3SYB3 417 aaPredicted RBP24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 FAM173BQ6P4H8 233 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 FOXD4L3Q6VB84 417 aaPredicted RBP24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 MBOAT7Q96N66 472 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 ZNF577Q9BSK1 485 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 PKD2L1Q9P0L9 805 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 ZDHHC9Q9Y397 364 aa24.45■■□□□ 1.5
TSPAN9-208ENST00000640568 SPATA31C2B4DYI2 1134 aa24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 WNT7AO00755 349 aa24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 MYCP01106 439 aaPredicted RBP24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 POTEDQ86YR6 584 aa24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 ZNF396Q96N95 335 aaPredicted RBP24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 CEP131Q9UPN4 1083 aa24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 PCDHB6Q9Y5E3 794 aa24.44■■□□□ 1.5
TSPAN9-208ENST00000640568 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 NKRFO15226 690 aaKnown RBP eCLIP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 ARIH2O95376 493 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 BAG4O95429 457 aaKnown RBP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 SEMA3FQ13275 785 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 NEDD9Q14511 834 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 CALCRLQ16602 461 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 LY6KQ17RY6 165 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 GIMAP8Q8ND71 665 aaPredicted RBP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 LENG9Q96B70 501 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 AGO4Q9HCK5 861 aaKnown RBP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 TCEAL9Q9UHQ7 104 aa24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 DDX41Q9UJV9 622 aaKnown RBP24.43■■□□□ 1.5
TSPAN9-208ENST00000640568 FRMPD3Q5JV73 1810 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 MSCO60682 206 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 RARBP10826 455 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 SMPD1P17405 629 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 DUSP28Q4G0W2 176 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 ARMC5Q96C12 935 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 SDF4Q9BRK5 362 aa24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.42■■□□□ 1.5
TSPAN9-208ENST00000640568 IPO5O00410 1097 aaKnown RBP24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 MSH4O15457 936 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 UBA1P22314 1058 aaKnown RBP24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 ANO1Q5XXA6 986 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 CCDC62Q6P9F0 684 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 ZNF333Q96JL9 665 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 UIMC1Q96RL1 719 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 SENP7Q9BQF6 1050 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 UNC93B1Q9H1C4 597 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 DDX20Q9UHI6 824 aaKnown RBP24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 TCHHQ07283 1943 aa24.41■■□□□ 1.5
TSPAN9-208ENST00000640568 TBX3O15119 743 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 GGPS1O95749 300 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 BMP15O95972 392 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 GH1P01241 217 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 CCL5P13501 91 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 CEBPZQ03701 1054 aaKnown RBP24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 MTFR1Q15390 333 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 DHX37Q8IY37 1157 aaKnown RBP24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 SLFN12Q8IYM2 578 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 RNF208Q9H0X6 261 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 MLXIPQ9HAP2 919 aa24.4■■□□□ 1.5
TSPAN9-208ENST00000640568 SORBS3O60504 671 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 ATP9AO75110 1047 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 OR52Z1P0C646 297 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 KCNA2P16389 499 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 SP2Q02086 613 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 SF3A1Q15459 793 aaKnown RBP24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 LRCH2Q5VUJ6 765 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 TLK2Q86UE8 772 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 OR6J1Q8NGC5 347 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 ETNPPLQ8TBG4 499 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 COPS5Q92905 334 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 FAM20AQ96MK3 541 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 TEKT3Q9BXF9 490 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 AP5M1Q9H0R1 490 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 SPC25Q9HBM1 224 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 KCNMB3Q9NPA1 279 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 TBC1D22BQ9NU19 505 aa24.39■■□□□ 1.5
TSPAN9-208ENST00000640568 NFASCO94856 1347 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms