RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TRIM60Q495X7 471 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 KCNV1Q6PIU1 500 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 CYP2W1Q8TAV3 490 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 EMID1Q96A84 441 aaPredicted RBP30.55■■■□□ 2.48
VEGFA-231ENST00000640499 STARD7Q9NQZ5 370 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 ORC3Q9UBD5 711 aaPredicted RBP30.55■■■□□ 2.48
VEGFA-231ENST00000640499 ELP1O95163 1332 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 M0R2N6 131 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 SORBS3O60504 671 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 GNA11P29992 359 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 CDK7P50613 346 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 CELF3Q5SZQ8 465 aaKnown RBP30.54■■■□□ 2.48
VEGFA-231ENST00000640499 MYSM1Q5VVJ2 828 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 CCDC148Q8NFR7 591 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 TELO2Q9Y4R8 837 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 CEP290O15078 2479 aa30.54■■■□□ 2.48
VEGFA-231ENST00000640499 DOCK5Q9H7D0 1870 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 ATP9AO75110 1047 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 CPT1AP50416 773 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 NLRP5P59047 1200 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 PURAQ00577 322 aaKnown RBP30.53■■■□□ 2.48
VEGFA-231ENST00000640499 REXO1Q8N1G1 1221 aaKnown RBP30.53■■■□□ 2.48
VEGFA-231ENST00000640499 GLT1D1Q96MS3 346 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 KCNJ14Q9UNX9 436 aa30.53■■■□□ 2.48
VEGFA-231ENST00000640499 FIBPO43427 364 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 GGPS1O95749 300 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 MMP3P08254 477 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 GNPTABQ3T906 1256 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 JADE2Q9NQC1 790 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 PCDHA4Q9UN74 947 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 ATP11BQ9Y2G3 1177 aa30.52■■■□□ 2.48
VEGFA-231ENST00000640499 ZEB2O60315 1214 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 PSMC6P62333 389 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 TLE2Q04725 743 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 LAMC2Q13753 1193 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 HSDL1Q3SXM5 330 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 CCDC83Q8IWF9 413 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 DHX37Q8IY37 1157 aaKnown RBP30.51■■■□□ 2.47
VEGFA-231ENST00000640499 SLC43A3Q8NBI5 491 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 GPRASP2Q96D09 838 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 ZSCAN31Q96LW9 406 aaPredicted RBP30.51■■■□□ 2.47
VEGFA-231ENST00000640499 PHF20Q9BVI0 1012 aa30.51■■■□□ 2.47
VEGFA-231ENST00000640499 MYL3P08590 195 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 ARHGAP4P98171 946 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 PRPF38BQ5VTL8 546 aaKnown RBP30.5■■■□□ 2.47
VEGFA-231ENST00000640499 NLRX1Q86UT6 975 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 DAGLBQ8NCG7 672 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 MXRA8Q9BRK3 442 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 EHMT1Q9H9B1 1298 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 ZMYND8Q9ULU4 1186 aaPredicted RBP30.5■■■□□ 2.47
VEGFA-231ENST00000640499 NR2E3Q9Y5X4 410 aa30.5■■■□□ 2.47
VEGFA-231ENST00000640499 CABYRO75952 493 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 CYP3A4P08684 503 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 HOXD8P13378 290 aaPredicted RBP30.49■■■□□ 2.47
VEGFA-231ENST00000640499 KCNA2P16389 499 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 FAM177A1Q8N128 213 aaPredicted RBP30.49■■■□□ 2.47
VEGFA-231ENST00000640499 PPTC7Q8NI37 304 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 BICD2Q8TD16 824 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 POLR3EQ9NVU0 708 aa30.49■■■□□ 2.47
VEGFA-231ENST00000640499 SCN10AQ9Y5Y9 1956 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 ARVCFO00192 962 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 MEIS1O00470 390 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 ANKRD33Q7Z3H0 272 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 BLIDQ8IZY5 108 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 KAT2BQ92831 832 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 VTI1AQ96AJ9 217 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 SENP7Q9BQF6 1050 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 ALG1Q9BT22 464 aa30.48■■■□□ 2.47
VEGFA-231ENST00000640499 A0A0U1RQG5 324 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-231ENST00000640499 FAM86B1E9PN63 330 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 FAM86B2P0C5J1 330 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 ARP10275 920 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 SYN1P17600 705 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 MTMR1Q13613 665 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 ITGA7Q13683 1181 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 CEP55Q53EZ4 464 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 MCTP2Q6DN12 878 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 CYFIP1Q7L576 1253 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 SH3RF1Q7Z6J0 888 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 PPP1R13LQ8WUF5 828 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 SPATA33Q96N06 139 aa30.47■■■□□ 2.47
VEGFA-231ENST00000640499 MTG1Q9BT17 334 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-231ENST00000640499 IGLV3-22A0A075B6J6 115 aa30.46■■■□□ 2.47
VEGFA-231ENST00000640499 SH2B1Q9NRF2 756 aaPredicted RBP30.46■■■□□ 2.47
VEGFA-231ENST00000640499 KCNH7Q9NS40 1196 aa30.46■■■□□ 2.47
VEGFA-231ENST00000640499 KPNA6O60684 536 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 PQBP1O60828 265 aaKnown RBP30.45■■■□□ 2.47
VEGFA-231ENST00000640499 FAAP100Q0VG06 881 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 NEDD9Q14511 834 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 BRDTQ58F21 947 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-231ENST00000640499 GALNT17Q6IS24 598 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 METTL7BQ6UX53 244 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 OXER1Q8TDS5 423 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 TOX2Q96NM4 488 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 MLXIPQ9HAP2 919 aa30.45■■■□□ 2.47
VEGFA-231ENST00000640499 TRIM43BA6NCK2 446 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 ST18O60284 1047 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 DGKDQ16760 1214 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 FAM126BQ8IXS8 530 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 WASF1Q92558 559 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms