RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 FAM26FQ5R3K3 315 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 BEND6Q5SZJ8 279 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 COL23A1Q86Y22 540 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 CCDC155Q8N6L0 562 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SMCR8Q8TEV9 937 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 ZNF622Q969S3 477 aaKnown RBP eCLIP9.95□□□□□ -0.82
RTTN-216ENST00000640376 DNAJC19Q96DA6 116 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ANO3Q9BYT9 981 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 UBXN6Q9BZV1 441 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 LRRC27Q9C0I9 530 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 EHD4Q9H223 541 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ZCCHC17Q9NP64 241 aaKnown RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 PANK4Q9NVE7 773 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ARHGAP20Q9P2F6 1191 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 KIAA1024Q9UPX6 916 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 NPHP3-ACAD11A0A0J9YXS1 232 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 LRRC53A6NM62 1247 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ALDH1B1P30837 517 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 STAT3P40763 770 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 VAV2P52735 878 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 NELFCDQ8IXH7 590 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 MMS19Q96T76 1030 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 DEF6Q9H4E7 631 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 GDF11O95390 407 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 MMP10P09238 476 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 TAL1P17542 331 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 KIF11P52732 1056 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 KIF5AQ12840 1032 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SEPT2Q15019 361 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 CERKLQ49MI3 558 aaPredicted RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 CCDC40Q4G0X9 1142 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 RRAGAQ7L523 313 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 GPBP1Q86WP2 473 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 CAGE1Q8TC20 777 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SECISBP2LQ93073 1101 aaKnown RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 CCDC17Q96LX7 622 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ZDHHC15Q96MV8 337 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 IFIH1Q9BYX4 1025 aaKnown RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 NT5C3AQ9H0P0 336 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 PLAGL2Q9UPG8 496 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 H3BQF6 201 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ICA1Q05084 483 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 PSMD2Q13200 908 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 USH1GQ495M9 461 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ZNF662Q6ZS27 426 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 HNRNPLLQ8WVV9 542 aaKnown RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 DRC1Q96MC2 740 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ABCB11O95342 1321 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 SMCHD1A6NHR9 2005 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 TRAF5O00463 557 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 MAP2K7O14733 419 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ZNF185O15231 689 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 PDE6BP35913 854 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 TUBB4BP68371 445 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 CDK17Q00537 523 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 IKQ13123 557 aaPredicted RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 ZCWPW2Q504Y3 356 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 PAPD7Q5XG87 772 aaKnown RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 POTEGQ6S5H5 508 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 POTEEQ6S8J3 1075 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 NLGN1Q8N2Q7 840 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 IQCDQ96DY2 449 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 MASTLQ96GX5 879 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 JADE2Q9NQC1 790 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 CAPN6Q9Y6Q1 641 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ATAD5Q96QE3 1844 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 SH3BP5LQ7L8J4 393 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 NEK11Q8NG66 645 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 DCAF4Q8WV16 495 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 PURBQ96QR8 312 aaKnown RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 TSGA10Q9BZW7 698 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 ZHX3Q9H4I2 956 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 MLXIPQ9HAP2 919 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 KCNMB3Q9NPA1 279 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
RTTN-216ENST00000640376 COL4A3BPQ9Y5P4 624 aa9.94□□□□□ -0.82
RTTN-216ENST00000640376 AKR1B10O60218 316 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 MED24O75448 989 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 KRT18P05783 430 aaKnown RBP9.93□□□□□ -0.82
RTTN-216ENST00000640376 HNRNPH3P31942 346 aaKnown RBP9.93□□□□□ -0.82
RTTN-216ENST00000640376 GYS2P54840 703 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 HYIQ5T013 277 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 HDXQ7Z353 690 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 CCDC65Q8IXS2 484 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 BAP1Q92560 729 aa9.93□□□□□ -0.82
RTTN-216ENST00000640376 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
RTTN-216ENST00000640376 KANSL2Q9H9L4 492 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms