RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
SPIN3-233ENST00000640039 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
SPIN3-233ENST00000640039 ORC3Q9UBD5 711 aaPredicted RBP18.11■□□□□ 0.49
SPIN3-233ENST00000640039 ELP1O95163 1332 aa18.1■□□□□ 0.49
SPIN3-233ENST00000640039 FIBPO43427 364 aa18.1■□□□□ 0.49
SPIN3-233ENST00000640039 CLK2P49760 499 aaKnown RBP18.1■□□□□ 0.49
SPIN3-233ENST00000640039 RTP1P59025 263 aa18.1■□□□□ 0.49
SPIN3-233ENST00000640039 DHX37Q8IY37 1157 aaKnown RBP18.1■□□□□ 0.49
SPIN3-233ENST00000640039 CDHR1Q96JP9 859 aa18.1■□□□□ 0.49
SPIN3-233ENST00000640039 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
SPIN3-233ENST00000640039 ATP11BQ9Y2G3 1177 aa18.1■□□□□ 0.49
SPIN3-233ENST00000640039 A0A0U1RQG5 324 aaPredicted RBP18.09■□□□□ 0.49
SPIN3-233ENST00000640039 KPNA6O60684 536 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 CTDNEP1O95476 244 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 MYL3P08590 195 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 UBA1P22314 1058 aaKnown RBP18.09■□□□□ 0.49
SPIN3-233ENST00000640039 ICAM3P32942 547 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 ARHGAP1Q07960 439 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 LAMC2Q13753 1193 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 CXCL17Q6UXB2 119 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 GPRASP2Q96D09 838 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 AIFM3Q96NN9 605 aa18.09■□□□□ 0.49
SPIN3-233ENST00000640039 A6NJR5 290 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 GGPS1O95749 300 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 ZNF76P36508 570 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 SREBF1P36956 1147 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 NEDD9Q14511 834 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 SNX17Q15036 470 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 TRIM60Q495X7 471 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 CELF3Q5SZQ8 465 aaKnown RBP18.08■□□□□ 0.48
SPIN3-233ENST00000640039 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 GALNT17Q6IS24 598 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 CCDC83Q8IWF9 413 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 NSUN7Q8NE18 718 aaKnown RBP18.08■□□□□ 0.48
SPIN3-233ENST00000640039 AFG1LQ8WV93 481 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.48
SPIN3-233ENST00000640039 MLXIPQ9HAP2 919 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 PCDHA4Q9UN74 947 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.48
SPIN3-233ENST00000640039 MROH7Q68CQ1 1323 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 SPATA31C2B4DYI2 1134 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 MMP3P08254 477 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 ARHGAP4P98171 946 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 MTMR1Q13613 665 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 DGKDQ16760 1214 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 RASGRP4Q8TDF6 673 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 MTG1Q9BT17 334 aaPredicted RBP18.07■□□□□ 0.48
SPIN3-233ENST00000640039 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 PRKAG2Q9UGJ0 569 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
SPIN3-233ENST00000640039 A0A1W2PPC1 479 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 MAFGO15525 162 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 SORBS3O60504 671 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 PQBP1O60828 265 aaKnown RBP18.06■□□□□ 0.48
SPIN3-233ENST00000640039 ITGB5P18084 799 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 PURAQ00577 322 aaKnown RBP18.06■□□□□ 0.48
SPIN3-233ENST00000640039 SP2Q02086 613 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 MYSM1Q5VVJ2 828 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 GIMAP8Q8ND71 665 aaPredicted RBP18.06■□□□□ 0.48
SPIN3-233ENST00000640039 SENP7Q9BQF6 1050 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 JADE2Q9NQC1 790 aa18.06■□□□□ 0.48
SPIN3-233ENST00000640039 DCDC2CA8MYV0 355 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 ARVCFO00192 962 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
SPIN3-233ENST00000640039 JAK2O60674 1132 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 DTNBO60941 627 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 MCM2P49736 904 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 SEMA3FQ13275 785 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 ITGA7Q13683 1181 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 TRIM29Q14134 588 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 CEP55Q53EZ4 464 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 METTL7BQ6UX53 244 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 CYFIP1Q7L576 1253 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 DAGLBQ8NCG7 672 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 GDF15Q99988 308 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
SPIN3-233ENST00000640039 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 BRMS1Q9HCU9 246 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
SPIN3-233ENST00000640039 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
SPIN3-233ENST00000640039 ADAMTS3O15072 1205 aa18.04■□□□□ 0.48
SPIN3-233ENST00000640039 TLE2Q04725 743 aa18.04■□□□□ 0.48
SPIN3-233ENST00000640039 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
SPIN3-233ENST00000640039 PHF20Q9BVI0 1012 aa18.04■□□□□ 0.48
SPIN3-233ENST00000640039 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
SPIN3-233ENST00000640039 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
SPIN3-233ENST00000640039 SOX1O00570 391 aaPredicted RBP18.03■□□□□ 0.48
SPIN3-233ENST00000640039 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
SPIN3-233ENST00000640039 CYP3A4P08684 503 aa18.03■□□□□ 0.48
SPIN3-233ENST00000640039 FDPSP14324 419 aaKnown RBP18.03■□□□□ 0.48
SPIN3-233ENST00000640039 SYN1P17600 705 aa18.03■□□□□ 0.48
SPIN3-233ENST00000640039 CHMP4BP1P59074 171 aa18.03■□□□□ 0.48
SPIN3-233ENST00000640039 PSMC6P62333 389 aa18.03■□□□□ 0.48
SPIN3-233ENST00000640039 HMGN5P82970 282 aaKnown RBP18.03■□□□□ 0.48
SPIN3-233ENST00000640039 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
SPIN3-233ENST00000640039 NIPA1Q7RTP0 329 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms